miRBase entry: ocu-mir-495

Stem-loop ocu-mir-495

Accession

MI0039424

Description

Oryctolagus cuniculus ocu-mir-495 precursor miRNA

Sequence

GAAGUUGCCCAUGUUAUUUUCGcuguaugugugacgAAACAAACAUGGUGCACUUCUU
(((((.(((((((((..((((((.........).)))))..))))))).)))))))..

Structure

--     U  -       AU     - ugu 
  GAAGU GC CCAUGUU  UUUCG c   a
  ||||| || |||||||  ||||| |   u
  CUUCA CG GGUACAA  AAAgc g   g
UU     -  U       AC     a ugu

Annotation confidence Not enough data

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Genome context

GL019048.1: 130083-130140 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from ocu-mir-495

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-495-5p

Accession	MIMAT0048483
Description	Oryctolagus cuniculus ocu-miR-495-5p mature miRNA
Sequence	1 - GAAGUUGCCCAUGUUAUUUUCG - 22
Evidence	experimental Illumina [1]

Mature ocu-miR-495-3p

Accession	MIMAT0048484
Description	Oryctolagus cuniculus ocu-miR-495-3p mature miRNA
Sequence	37 - AAACAAACAUGGUGCACUUCUU - 58
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344