miRBase entry: ocu-mir-497

Stem-loop ocu-mir-497


Accession
MI0039426
Description
Oryctolagus cuniculus ocu-mir-497 precursor miRNA


Sequence

CAGCAGCACACUGUGGUUUGUAcggcacuguggccacgucCAAACCACACUGUGGUGUUAGA
.((((.((((.(((((((((.(((((......)))..)).))))))))).)))).))))...

Structure
--C    G    C         U  --   ac 
   AGCA CACA UGUGGUUUG Ac  ggc  u
   |||| |||| ||||||||| ||  |||   
   UUGU GUGU ACACCAAAC ug  ccg  g
AGA    G    C         c  ca   gu 


Annotation confidence Not enough data
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Genome context
CM000808.1: 12026199-12026260 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-497
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-497-5p

Accession MIMAT0048487
Description Oryctolagus cuniculus ocu-miR-497-5p mature miRNA
Sequence 1 - CAGCAGCACACUGUGGUUUGUA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-497-3p

Accession MIMAT0048488
Description Oryctolagus cuniculus ocu-miR-497-3p mature miRNA
Sequence 41 - CAAACCACACUGUGGUGUUAGA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344