miRBase entry: ocu-mir-503

Stem-loop ocu-mir-503

Accession

MI0039432

Description

Oryctolagus cuniculus ocu-mir-503 precursor miRNA

Sequence

UAGCAGCGGGAACAGUACUGCagugagcuauaggacuucuGGAGUAUUGCUUCUGCUGCCAGGg
..(((((((((.(((((((.(((.(((((...)).)))))).))))))).))))))))).....

Structure

---UA         A       G   u   -  a 
     GCAGCGGGA CAGUACU Cag gag cu  
     ||||||||| ||||||| ||| ||| || u
     CGUCGUCUU GUUAUGA Guc uuc gg  
gGGAC         C       G   -   a  a

Annotation confidence Not enough data

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Genome context

CM000811.1: 108855772-108855835 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from ocu-mir-503

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ocu-miR-503-5p

Accession	MIMAT0048499
Description	Oryctolagus cuniculus ocu-miR-503-5p mature miRNA
Sequence	1 - UAGCAGCGGGAACAGUACUGC - 21
Evidence	experimental Illumina [1]

Mature ocu-miR-503-3p

Accession	MIMAT0048500
Description	Oryctolagus cuniculus ocu-miR-503-3p mature miRNA
Sequence	41 - GGAGUAUUGCUUCUGCUGCCAGG - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 26733575
The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
"Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
"Genome Biol Evol (2016) 8:330-344