miRBase entry: ocu-mir-599

Stem-loop ocu-mir-599


Accession
MI0039451
Description
Oryctolagus cuniculus ocu-mir-599 precursor miRNA


Sequence

UUUGAUAAGCCGACAUGGGACAgggacucuuuucacugUUGUGUCAGUUUAUCAAACC
((((((((((.(((((..((((((((.....))).)))))))))).))))))))))..

Structure
--          C     GG     -   c 
  UUUGAUAAGC GACAU  GACAg gga u
  |||||||||| |||||  ||||| ||| c
  AAACUAUUUG CUGUG  UUguc cuu u
CC          A     --     a   u 


Annotation confidence Not enough data
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Genome context
CM000792.1: 115199370-115199427 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ocu-mir-599
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-599-5p

Accession MIMAT0048537
Description Oryctolagus cuniculus ocu-miR-599-5p mature miRNA
Sequence 1 - UUUGAUAAGCCGACAUGGGACA - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-599-3p

Accession MIMAT0048538
Description Oryctolagus cuniculus ocu-miR-599-3p mature miRNA
Sequence 39 - UUGUGUCAGUUUAUCAAACC - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344