miRBase entry: ocu-mir-655

Stem-loop ocu-mir-655


Accession
MI0039456
Description
Oryctolagus cuniculus ocu-mir-655 precursor miRNA


Sequence

AGAGGUUAACCGUGUUAUGUUCgcuuguucaucaugaAUAAUACAUGGUUAACCUCUUU
(((((((((((((((..((((((..((.....))))))))..)))))))))))))))..

Structure
--               UA      cu  u 
  AGAGGUUAACCGUGU  UGUUCg  ug u
  |||||||||||||||  ||||||  || c
  UCUCCAAUUGGUACA  AUAagu  ac a
UU               UA      --  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL019048.1: 139340-139398 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from ocu-mir-655
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ocu-miR-655-5p

Accession MIMAT0048547
Description Oryctolagus cuniculus ocu-miR-655-5p mature miRNA
Sequence 1 - AGAGGUUAACCGUGUUAUGUUC - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-655-3p

Accession MIMAT0048548
Description Oryctolagus cuniculus ocu-miR-655-3p mature miRNA
Sequence 38 - AUAAUACAUGGUUAACCUCUUU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344