miRBase entry: ocu-mir-708

Stem-loop ocu-mir-708


Accession
MI0039463
Description
Oryctolagus cuniculus ocu-mir-708 precursor miRNA


Sequence

AAGGAGCUUACAAUCUAGCUGGGggugaaugacgugcacgcgaacaCAACUAGACUGUGAGCUUCUAGA
.(((((((((((.(((((.((.(..((..((.....))..))..).)).))))).)))))))))))...

Structure
--A           A     C  G gg  aa  a 
   AGGAGCUUACA UCUAG UG G  ug  ug c
   ||||||||||| ||||| || |  ||  || g
   UCUUCGAGUGU AGAUC AC c  gc  ac u
AGA           C     A  a aa  gc  g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM000790.1: 137399785-137399853 [+]

Database links

Mature ocu-miR-708-5p

Accession MIMAT0048561
Description Oryctolagus cuniculus ocu-miR-708-5p mature miRNA
Sequence 1 - AAGGAGCUUACAAUCUAGCUGGG - 23
Evidence experimental
Illumina [1]

Mature ocu-miR-708-3p

Accession MIMAT0048562
Description Oryctolagus cuniculus ocu-miR-708-3p mature miRNA
Sequence 47 - CAACUAGACUGUGAGCUUCUAGA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344