miRBase entry: ocu-mir-1296

Stem-loop ocu-mir-1296


Accession
MI0039479
Description
Oryctolagus cuniculus ocu-mir-1296 precursor miRNA


Sequence

UUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucuguggggAGUGGGGCUUCGACCCUAACC
((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))..

Structure
--      CCCU       U      ua    a 
  UUAGGG    GGCUCCA CUCCuu  ggaa a
  ||||||    ||||||| ||||||  ||||  
  AAUCCC    UCGGGGU GAgggg  ucuu c
CC      AGCU       -      ug    c 


Annotation confidence Not enough data
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Genome context
CM000807.1: 22894373-22894437 [+]

Database links

Mature ocu-miR-1296-5p

Accession MIMAT0048593
Description Oryctolagus cuniculus ocu-miR-1296-5p mature miRNA
Sequence 1 - UUAGGGCCCUGGCUCCAUCUCC - 22
Evidence experimental
Illumina [1]

Mature ocu-miR-1296-3p

Accession MIMAT0048594
Description Oryctolagus cuniculus ocu-miR-1296-3p mature miRNA
Sequence 45 - AGUGGGGCUUCGACCCUAACC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26733575
    The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
    "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
    "Genome Biol Evol (2016) 8:330-344