Stem-loop hsa-mir-3085

Accession

MI0039500

Description

Homo sapiens hsa-mir-3085 precursor miRNA

Literature search

2 open access papers mention hsa-mir-3085
(5 sentences)

Sequence

62 reads, 1 reads per million, 17 experiments

cccuacucugggaAGGUGCCAUUCUGAGGGCCAGGAGUuugauuaugugucacUCUGGCUGCUAUGGCCCCCUCccagggucugg
((..(((((((((.((.(((((......((((((.(((..(((.....))))))))))))...))))).)).)))))))))..))

Structure

  cu         A  U     UCUGAG      G   uu   u 
cc  acucuggga GG GCCAU      GGCCAG AGU  gau a
||  ||||||||| || |||||      |||||| |||  ||| u
gg  ugggaccCU CC CGGUA      UCGGUC Uca  cug g
  uc         C  C     ---UCG      -   --   u 

Annotation confidence Medium

Genome context

chr10: 97875813-97875897 [-]

Mature hsa-miR-3085-5p

• Accession: MIMAT0048635
• Description: Homo sapiens hsa-miR-3085-5p mature miRNA
• Sequence: 14 - AGGUGCCAUUCUGAGGGCCAGGAGU - 38
• Evidence: not_experimental

Mature hsa-miR-3085-3p

• Accession: MIMAT0048636
• Description: Homo sapiens hsa-miR-3085-3p mature miRNA
• Sequence: 54 - UCUGGCUGCUAUGGCCCCCUC - 74
• Evidence: not_experimental

References

1. PubMed ID: 26473382
   A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
   "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
   "Annu Rev Genet (2015) 49:213-242