Stem-loop sequence dre-mir-181b-3

AccessionMI0039514 (change log)
DescriptionDanio rerio miR-181b-3 stem-loop
Literature search

12 open access papers mention dre-mir-181b-3
(42 sentences)

   aaa  u    aucaa         cug          gga  g 
5'    gg caca     cauucauug   ucgguggguu   uu u
      || ||||     |||||||||   ||||||||||   ||  
3'    cc gugu     guaaguaac   agucacucga   aa a
   gac  u    -caac         --a          aag  a 
Get sequence
Deep sequencing
99133 reads, 5.76e+03 reads per million, 11 experiments
Confidence Annotation confidence: high
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Genome context
Coordinates (GRCz11; GCA_000002035.4) Overlapping transcripts
chr22: 22825793-22825877 [-]
Clustered miRNAs
< 10kb from dre-mir-181b-3
dre-mir-181a-1chr22: 22826004-22826087 [-]
dre-mir-181b-3chr22: 22825793-22825877 [-]
Database links

Mature sequence dre-miR-181b-5p

Accession MIMAT0001270
Previous IDsdre-miR-181b

14 - 


 - 35

Get sequence
Deep sequencing297640 reads, 11 experiments
Evidence experimental; cloned [1-2]

Mature sequence dre-miR-181b-3-3p

Accession MIMAT0048656

54 - 


 - 74

Get sequence
Deep sequencing202 reads, 9 experiments
Evidence not experimental


PMID:26473382 "A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome" Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ Annu Rev Genet. 49:213-242(2015).