Stem-loop dre-mir-128-3

Accession

MI0039520

Description

Danio rerio dre-mir-128-3 precursor miRNA

Literature search

5 open access papers mention dre-mir-128-3
(9 sentences)

Sequence

4727 reads, 235 reads per million, 11 experiments

gagcggcugaaugCGGGGCCGUGGCGCUGUCUGAGAcgcucuacuauucUCACAGUGAACCGGUCUCUUUUccagccgcuc
(((((((((.....(((((((...((((((..((((...........))))))))))...))))))).....)))))))))

Structure

         aaugC       UGG      CU    cgcu 
gagcggcug     GGGGCCG   CGCUGU  GAGA    c
|||||||||     |||||||   ||||||  ||||    u
cucgccgac     CUCUGGC   GUGACA  CUcu    a
         cUUUU       CAA      --    uauc 

Annotation confidence Not enough data

Genome context

KN150366.1: 5626-5706 [-]

Mature dre-miR-128-3p

• Accession: MIMAT0001824
• Description: Danio rerio dre-miR-128-3p mature miRNA
• Sequence: 50 - UCACAGUGAACCGGUCUCUUUU - 71
• Evidence: experimental ; cloned [1]

Mature dre-miR-128-3-5p

• Accession: MIMAT0048666
• Description: Danio rerio dre-miR-128-3-5p mature miRNA
• Sequence: 14 - CGGGGCCGUGGCGCUGUCUGAGA - 36
• Evidence: not_experimental

References

1. PubMed ID: 26473382
   A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
   "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
   "Annu Rev Genet (2015) 49:213-242