Stem-loop gga-mir-9-4

Accession

MI0039523

Description

Gallus gallus gga-mir-9-4 precursor miRNA

Literature search

19 open access papers mention gga-mir-9-4
(352 sentences)

Sequence

5208455 reads, 54840 reads per million, 5 experiments

ggguugguuguuaUCUUUGGUUAUCUAGCUGUAUGAguggugucgauucuucAUAAAGCUAGAUAACCGAAAGUAaaaauaacccc
((((((....((((.(((((((((((((((.((((((.(((....))).)))))).))))))))))))))).))))...)))))).

Structure

-      guug    C               G      u   g 
 ggguug    uuaU UUUGGUUAUCUAGCU UAUGAg ggu u
 ||||||    |||| ||||||||||||||| |||||| |||  
 cccaau    aAUG AAGCCAAUAGAUCGA AUAcuu uua c
c      -aaa    A               A      c   g 

Annotation confidence High

Genome context

chr25: 1538381-1538466 [-]

Mature gga-miR-9-5p

• Accession: MIMAT0001195
• Description: Gallus gallus gga-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUGA - 36
• Evidence: not_experimental

Mature gga-miR-9-4-3p

• Accession: MIMAT0048671
• Description: Gallus gallus gga-miR-9-4-3p mature miRNA
• Sequence: 53 - AUAAAGCUAGAUAACCGAAAGUA - 75
• Evidence: not_experimental

References

1. PubMed ID: 26473382
   A Uniform System for the Annotation of Vertebrate microRNA Genes and the Evolution of the Human microRNAome
   "Fromm B, Billipp T, Peck LE, Johansen M, Tarver JE, King BL, Newcomb JM, Sempere LF, Flatmark K, Hovig E, Peterson KJ"
   "Annu Rev Genet (2015) 49:213-242