miRBase entry: mmu-mir-12198

Stem-loop mmu-mir-12198


Accession
MI0040644
Description
Mus musculus mmu-mir-12198 precursor miRNA


Sequence

149 reads, 15 reads per million, 9 experiments
agagcacacguccagccagaguuccugugcucuaggcgagcaGACUCAGGAGGACUGCCGGa
...(((...((((..((.(((((....(((((.....)))))))))).)).)))))))....

Structure
-aga   cac    ag  a     ccug     u 
    gca   gucc  cc gaguu    ugcuc a
    |||   ||||  || |||||    ||||| g
    CGU   CAGG  GG CUCAG    acgag g
aGGC   ---    -A  A     ----     c 


Annotation confidence Not enough data
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Genome context
chr5: 32092723-32092784 [+]

Database links

Mature mmu-miR-12198-3p

Accession MIMAT0049865
Description Mus musculus mmu-miR-12198-3p mature miRNA
Sequence 43 - GACUCAGGAGGACUGCCGG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973