miRBase entry: gga-mir-425

Stem-loop gga-mir-425


Accession
MI0040676
Description
Gallus gallus gga-mir-425 precursor miRNA

Literature search
2 open access papers mention gga-mir-425
(2 sentences)

Sequence

90010 reads, 1141 reads per million, 5 experiments
AAUGACACGAUCACUCCCGCUGAgcgcgcagccacagagcCAUCGGGGAUGUCGUGUCUGUCc
...(((((((.((.(((((.((.((.(.........).)))).))))).))))))))).....

Structure
--AAU       U  C     C  A  g gca 
     GACACGA CA UCCCG UG gc c   g
     ||||||| || ||||| || || |   c
     CUGUGCU GU GGGGC AC cg g   c
cCUGU       -  A     U  -  a aca 


Annotation confidence Not enough data
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Genome context
chr12: 11671363-11671425 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-425
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-425-5p

Accession MIMAT0049919
Description Gallus gallus gga-miR-425-5p mature miRNA
Sequence 1 - AAUGACACGAUCACUCCCGCUGA - 23
Evidence experimental
Illumina [1]

Mature gga-miR-425-3p

Accession MIMAT0049920
Description Gallus gallus gga-miR-425-3p mature miRNA
Sequence 41 - CAUCGGGGAUGUCGUGUCUGUC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973