miRBase entry: gga-mir-12258

Stem-loop gga-mir-12258


Accession
MI0040723
Description
Gallus gallus gga-mir-12258 precursor miRNA


Sequence

7 reads, 0 reads per million, 4 experiments
UGCACGGCUGCAGCCUCCUCACCcauaucccaaggagaagcaggGGAGGAGGACGCAGCCAUGUGCu
.((((((((((..(((((((.(((...(((...)))......))))))))))..))))))..)))).

Structure
U    --      AG       A   ---aua   c 
 GCAC  GGCUGC  CCUCCUC CCc      ucc  
 ||||  ||||||  ||||||| |||      ||| a
 CGUG  CCGACG  GGAGGAG Ggg      agg  
u    UA      CA       -   acgaag   a 


Annotation confidence Not enough data
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Genome context
chr28: 3917469-3917535 [+]

Database links

Mature gga-miR-12258-5p

Accession MIMAT0050007
Description Gallus gallus gga-miR-12258-5p mature miRNA
Sequence 1 - UGCACGGCUGCAGCCUCCUCACC - 23
Evidence experimental
Illumina [1]

Mature gga-miR-12258-3p

Accession MIMAT0050008
Description Gallus gallus gga-miR-12258-3p mature miRNA
Sequence 45 - GGAGGAGGACGCAGCCAUGUGC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973