miRBase entry: mdo-mir-12299-1

Stem-loop mdo-mir-12299-1


Accession
MI0040782
Description
Monodelphis domestica mdo-mir-12299-1 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
AUCUAGGGGAAGGAGUGAUUGUuaagaucaaauucaaCAUCAUUGCUUCCCUCUACGAcu
.(((((((((((.((((((.(((..((......))))))))))).)))))).))).))..

Structure
-A  -   -      G      U   aa  uc 
  UC UAG GGGAAG AGUGAU GUu  ga  a
  || ||| |||||| |||||| |||  ||   
  AG AUC CCCUUC UUACUA Caa  cu  a
uc  C   U      G      -   --  ua 


Annotation confidence Not enough data
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Genome context
chr1: 156805235-156805294 [+]

Database links

Mature mdo-miR-12299-5p

Accession MIMAT0050103
Description Monodelphis domestica mdo-miR-12299-5p mature miRNA
Sequence 1 - AUCUAGGGGAAGGAGUGAUUGU - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-12299-3p

Accession MIMAT0050104
Description Monodelphis domestica mdo-miR-12299-3p mature miRNA
Sequence 38 - CAUCAUUGCUUCCCUCUACGA - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973