miRBase entry: mdo-mir-12308a

Stem-loop mdo-mir-12308a


Accession
MI0040799
Description
Monodelphis domestica mdo-mir-12308a precursor miRNA


Sequence

1301 reads, 31 reads per million, 5 experiments
agUGGAAAGAGCAUUGGAUUUGAaguuugagugccugaguucAAAUCCGUGCUCUGACACUUa
((((...(((((((.(((((((((.((.(.....).)).))))))))))))))))..))))..

Structure
--    GAA       U         g  u a 
  agUG   AGAGCAU GGAUUUGAa uu g g
  ||||   ||||||| ||||||||| || | u
  UCAC   UCUCGUG CCUAAAcuu ag c g
aU    -AG       -         g  u c 


Annotation confidence High
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Genome context
chr1: 468988543-468988605 [+]

Database links

Mature mdo-miR-12308a-5p

Accession MIMAT0050130
Description Monodelphis domestica mdo-miR-12308a-5p mature miRNA
Sequence 3 - UGGAAAGAGCAUUGGAUUUGA - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-12308a-3p

Accession MIMAT0050131
Description Monodelphis domestica mdo-miR-12308a-3p mature miRNA
Sequence 43 - AAAUCCGUGCUCUGACACUU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973