miRBase entry: mdo-mir-12335-1

Stem-loop mdo-mir-12335-1


Accession
MI0040839
Description
Monodelphis domestica mdo-mir-12335-1 precursor miRNA


Sequence

28 reads, 1 reads per million, 3 experiments
UUCAAAGCCAGCAUAACCCAuaacuggcgaaauggcuccagUUAUGGGUUAUGCUGGCUUUGa
.((((((((((((((((((((((((((.(......).))))))))))))))))))))))))))

Structure
U                          c aa 
 UCAAAGCCAGCAUAACCCAuaacugg g  a
 |||||||||||||||||||||||||| |   
 aGUUUCGGUCGUAUUGGGUAUUgacc c  u
-                          u gg 


Annotation confidence Not enough data
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Genome context
chr3: 19324683-19324745 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12335-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12335-5p

Accession MIMAT0050200
Description Monodelphis domestica mdo-miR-12335-5p mature miRNA
Sequence 1 - UUCAAAGCCAGCAUAACCCA - 20
Evidence experimental
Illumina [1]

Mature mdo-miR-12335-3p

Accession MIMAT0050201
Description Monodelphis domestica mdo-miR-12335-3p mature miRNA
Sequence 42 - UUAUGGGUUAUGCUGGCUUUG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973