miRBase entry: mdo-mir-12340

Stem-loop mdo-mir-12340


Accession
MI0040852
Description
Monodelphis domestica mdo-mir-12340 precursor miRNA


Sequence

UCCCUGUGUGCUCUUCUCUUUUAGGguguuggcaaaccuUAUGGAAACUGGAACCAGGUUUGUGUGG
..((((.((.((....(((..((((((........)))))).)))....)).)))))).........

Structure
-------UC    U  G  CUUC   UU      guu 
         CCUG GU CU    UCU  UAGGgu   g
         |||| || ||    |||  ||||||    
         GGAC CA GG    AGG  AUucca   g
GGUGUGUUU    -  A  UCAA   -U      aac 


Annotation confidence Not enough data
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Genome context
chr3: 421520911-421520977 [+]

Database links

Mature mdo-miR-12340-5p

Accession MIMAT0050220
Description Monodelphis domestica mdo-miR-12340-5p mature miRNA
Sequence 1 - UCCCUGUGUGCUCUUCUCUUUUAGG - 25
Evidence experimental
Illumina [1]

Mature mdo-miR-12340-3p

Accession MIMAT0050221
Description Monodelphis domestica mdo-miR-12340-3p mature miRNA
Sequence 40 - UAUGGAAACUGGAACCAGGUUUGUGUGG - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973