miRBase entry: mdo-mir-12345

Stem-loop mdo-mir-12345


Accession
MI0040857
Description
Monodelphis domestica mdo-mir-12345 precursor miRNA


Sequence

247 reads, 58 reads per million, 2 experiments
cugccuuauccagagaccagcugaccaggacauguccUUGGUUCUGUGAGAGGGGCAAUGGG
.((((((.(((((((.((((..(((........))).))))))))).))..)))))).....

Structure
----c      -a  -     a    cu   cag 
     ugccuu  uc cagag ccag  gac   g
     ||||||  || ||||| ||||  |||    
     ACGGGG  AG GUCUU GGUU  cug   a
GGGUA      AG  U     -    -c   uac 


Annotation confidence Not enough data
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Genome context
chr3: 499814746-499814807 [-]

Database links

Mature mdo-miR-12345-3p

Accession MIMAT0050230
Description Monodelphis domestica mdo-miR-12345-3p mature miRNA
Sequence 38 - UUGGUUCUGUGAGAGGGGCAAUGGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973