miRBase entry: mdo-mir-12297c-1

Stem-loop mdo-mir-12297c-1


Accession
MI0040862
Description
Monodelphis domestica mdo-mir-12297c-1 precursor miRNA


Sequence

13 reads, 2 reads per million, 4 experiments
ucCUUUGCGUGGCCCCUUGUUCUgagaguaacugaacgagaAUGAGGUGCUGUGCAAAGGACU
(((((((((((((.(((((((((...............))))))))).)))))))))))))..

Structure
--             C         gagagu 
  ucCUUUGCGUGGC CCUUGUUCU      a
  ||||||||||||| |||||||||      a
  AGGAAACGUGUCG GGAGUAaga      c
UC             U         gcaagu 


Annotation confidence Not enough data
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Genome context
chr4: 18052695-18052757 [-]

Database links

Mature mdo-miR-12297c-5p

Accession MIMAT0050206
Description Monodelphis domestica mdo-miR-12297c-5p mature miRNA
Sequence 3 - CUUUGCGUGGCCCCUUGUUCU - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-12297c-3p

Accession MIMAT0050239
Description Monodelphis domestica mdo-miR-12297c-3p mature miRNA
Sequence 42 - AUGAGGUGCUGUGCAAAGGACU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973