miRBase entry: mdo-mir-12385

Stem-loop mdo-mir-12385


Accession
MI0040918
Description
Monodelphis domestica mdo-mir-12385 precursor miRNA


Sequence

22568 reads, 460 reads per million, 5 experiments
ACUUAGCCUGUGUGGGUCUCCAUUcuucaacuuuaaaaUGAGGGCCUUGGACUAAGUGA
((((((((.....((((((.((((............)))).)))))).)).))))))..

Structure
--      -  UGUGU      C    cuuca 
  ACUUAG CC     GGGUCU CAUU     a
  |||||| ||     |||||| ||||      
  UGAAUC GG     UCCGGG GUaa     c
AG      A  ----U      A    aauuu 


Annotation confidence Not enough data
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Genome context
chr7: 123249086-123249144 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-12385
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-12385-5p

Accession MIMAT0050334
Description Monodelphis domestica mdo-miR-12385-5p mature miRNA
Sequence 1 - ACUUAGCCUGUGUGGGUCUCCAUU - 24
Evidence experimental
Illumina [1]

Mature mdo-miR-12385-3p

Accession MIMAT0050335
Description Monodelphis domestica mdo-miR-12385-3p mature miRNA
Sequence 39 - UGAGGGCCUUGGACUAAGUGA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973