miRBase entry: mdo-mir-7385i-1

Stem-loop mdo-mir-7385i-1


Accession
MI0040943
Description
Monodelphis domestica mdo-mir-7385i-1 precursor miRNA


Sequence

9687 reads, 185 reads per million, 5 experiments
AGGUCAGAUAUUCUGUCUUUCAgugauauacacccugGAACACAGGCUAGCUGAUCUGG
(((((((.((.(((((.((((((.(........))))))).))))).)).)))))))..

Structure
--       A  U     C      u aua 
  AGGUCAG UA UCUGU UUUCAg g   u
  ||||||| || ||||| |||||| |    
  UCUAGUC AU GGACA AAGguc c   a
GG       G  C     C      - cac 


Annotation confidence High
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Genome context
chrX: 4616788-4616846 [+]
Clustered miRNAs
11 other miRNAs are < 10 kb from mdo-mir-7385i-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7385i-5p

Accession MIMAT0050375
Description Monodelphis domestica mdo-miR-7385i-5p mature miRNA
Sequence 1 - AGGUCAGAUAUUCUGUCUUUCA - 22
Evidence experimental
Illumina [1]

Mature mdo-miR-7385i-3p

Accession MIMAT0050379
Description Monodelphis domestica mdo-miR-7385i-3p mature miRNA
Sequence 38 - GAACACAGGCUAGCUGAUCUGG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973