miRBase entry: mdo-mir-7371n

Stem-loop mdo-mir-7371n


Accession
MI0040964
Description
Monodelphis domestica mdo-mir-7371n precursor miRNA


Sequence

3471 reads, 208 reads per million, 4 experiments
cAGUUGUACCAGGUGUUACAUUUcauauaugacaaaAUGAUACAUCUAGUGCAACGGU
..(((((((.((((((..(((((((....)))...))))..)))))).)))))))...

Structure
-cA       C      UA    ---   u 
   GUUGUAC AGGUGU  CAUU   Uca a
   ||||||| ||||||  ||||   |||  
   CAACGUG UCUACA  GUAa   agu u
UGG       A      UA    aac   a 


Annotation confidence Not enough data
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Genome context
chrX: 40476156-40476213 [+]
Clustered miRNAs
16 other miRNAs are < 10 kb from mdo-mir-7371n
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7371n-5p

Accession MIMAT0050409
Description Monodelphis domestica mdo-miR-7371n-5p mature miRNA
Sequence 2 - AGUUGUACCAGGUGUUACAUUU - 23
Evidence experimental
Illumina [1]

Mature mdo-miR-7371n-3p

Accession MIMAT0050410
Description Monodelphis domestica mdo-miR-7371n-3p mature miRNA
Sequence 37 - AUGAUACAUCUAGUGCAACGGU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973