miRBase entry: mdo-mir-7375c-3

Stem-loop mdo-mir-7375c-3


Accession
MI0040974
Description
Monodelphis domestica mdo-mir-7375c-3 precursor miRNA


Sequence

2261 reads, 55 reads per million, 4 experiments
UAGCCCUUACCCCCCCGACUAGuaguauuaaucUGUUAGGGAGGGGAAAGGCAUUGC
..(((.((.((((((((((.((..........))))).))).)))))).))).....

Structure
---UA   C  A    -   -   U  uagu 
     GCC UU CCCC CCC GAC AG    a
     ||| || |||| ||| ||| ||     
     CGG AA GGGG GGG UUG Uc    u
CGUUA   A  -    A   A   -  uaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 44674818-44674874 [-]
Clustered miRNAs
13 other miRNAs are < 10 kb from mdo-mir-7375c-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7375c-3p

Accession MIMAT0050428
Description Monodelphis domestica mdo-miR-7375c-3p mature miRNA
Sequence 34 - UGUUAGGGAGGGGAAAGGCAUUGC - 57
Evidence experimental
Illumina [1]

Mature mdo-miR-7375c-5p

Accession MIMAT0050429
Description Monodelphis domestica mdo-miR-7375c-5p mature miRNA
Sequence 1 - UAGCCCUUACCCCCCCGACUAG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973