miRBase entry: gga-mir-1784b

Stem-loop gga-mir-1784b


Accession
MI0041072
Description
Gallus gallus gga-mir-1784b precursor miRNA


Sequence

47 reads, 3 reads per million, 3 experiments
UUCUGCUCCUAUUUAAGUCAAUggcagaacucucacUGAUUUCAAUAAGAGCAGAAUU
((((((((.((((.((((((.(((........))).)))))).)))).))))))))..

Structure
--        C    U      A   cag 
  UUCUGCUC UAUU AAGUCA Ugg   a
  |||||||| |||| |||||| |||    
  AAGACGAG AUAA UUUAGU acu   a
UU        A    C      c   cuc 


Annotation confidence Not enough data
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Genome context
chr3: 35737929-35737986 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-1784b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-1784b-5p

Accession MIMAT0050489
Description Gallus gallus gga-miR-1784b-5p mature miRNA
Sequence 1 - UUCUGCUCCUAUUUAAGUCAAU - 22
Evidence experimental
Illumina [1]

Mature gga-miR-1784b-3p

Accession MIMAT0050490
Description Gallus gallus gga-miR-1784b-3p mature miRNA
Sequence 37 - UGAUUUCAAUAAGAGCAGAAUU - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 29079676
    Sex-biased microRNA expression in mammals and birds reveals underlying regulatory mechanisms and a role in dosage compensation
    "Warnefors M, Mossinger K, Halbert J, Studer T, VandeBerg JL, Lindgren I, Fallahshahroudi A, Jensen P, Kaessmann H"
    Genome Res (2017) 12:1961-1973