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12 publications mentioning dme-mir-305

Open access articles that are associated with the species Drosophila melanogaster and mention the gene name mir-305. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

[+] score: 40
As shown in the Fig. 6A, sfr-mir-307-3p is highly expressed in haemolymph and expressed less in whole gut while there is a moderate to significant increase in the expression levels of sfr-mir-305-5p and Novel_miR-17 in the whole gut respectively. [score:7]
Though, the three novel miRs, Novel_miR-15, Novel_miR-16 and Novel_miR-17 showed an increase of an approximate 2 folds and more in their expression levels during 2 [nd] instar, only Novel_miR-15 showed more than 5 fold increase in its expression level which is even higher than that of sfr-mir-305-5p. [score:5]
As shown in the Fig. 6B, there is no significant change in distribution of expression in case of sfr-mir-305-5p and Novel_miR-17 while there is a moderate change in distribution of expression in case of sfr-mir-307-3p. [score:5]
Interestingly, the expression levels of miR-16 and mir-17 are at negligible levels while sfr-mir-71-3p showed a moderate change in its expression when compared to sfr-mir-305-5p. [score:4]
In addition, we performed the expression check for sfr-mir-305-5p, sfr-mir-307-3p and Novel_miR-17 in three segments of the whole gut, i. e., fore gut, mid gut and hind gut. [score:3]
The bar graphs (A, C) represent the expression level of each miRNA in a particular tissue part but in comparison to that of miR-305-5p. [score:3]
In addition to sfr-mir-305-5p, sfr-mir-307-3p displayed an increase of 2 fold and more in its expression levels in 6 [th] instar larvae. [score:3]
These results indicate that sfr-mir-305-5p could be a possible regulator for tissue development. [score:3]
The analysis revealed that, some of the known miRs (sfr-mir-305-5p, sfr-mir-307-3p) are expressed in a wide range of insect species (A. gambie, Culex sp, A. aegypti, A. mellifera, B. mori, T. castenum, D. melanogaster) while some (sfr-mir-71-3p) are restricted to a few (A. aegypti, B. mori, T. castenum). [score:3]
As observed from our results (Fig. 5), sfr-mir-305-5p is highly expressed as compared to the other known and novel miRs. [score:2]
As shown in Fig. 6C, Novel_miR-15 is highly expressed when compared to the other miRs, and sfr-mir-307-3p is approximately 2 fold higher compared to sfr-mir-305-5p. [score:1]
The miRs (sfr-mir-305-5p, sfr-mir-307-3p, sfr-mir-71-3p, sfr-mir-281, sfr-mir-317, sfr-mir-2756, sfr-mir-932, sfr-mir-184-3p, sfr-mir-2766, Novel_miR15, Novel_miR16, and Novel_miR17) were easily detectable in total RNA isolated from Sf21 cells (Fig. 4). [score:1]
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[+] score: 7
Coding sequences are in dark orange (with intron positions indicated by dashes); untranslated sequences are in light orange (with p(A)sites marked by asterisks, and miR-305 site 35 by a small arrow). [score:3]
The miR-305 site, however, is downstream of the intervening sequences in the H *[w+] alleles thus unable to exert its regulatory activity in these flies (Fig. 1). [score:2]
The 3′ UTR of H contains a binding site for miR-305 suggested to negatively regulate H activity 35. [score:2]
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[+] score: 6
The expression profiles of dme-mir-305, dme-mir-100, dme-mir-992 and dme-mir-283 are also weakly correlated to at least one miRNA from their clusters. [score:3]
Similarly, expression of dme-mir-305* from the 275~305 cluster does not correlate both to dme-mir-305 (r = 0.03) and dme-mir-275 (r = 0.16) (Figure 3c). [score:3]
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[+] score: 5
bmo-miR-275 and bmo-miR-305 belong to different miRNA families, mir-275 and mir-305. [score:1]
These newly identified miRNAs are bmo-miR-2a*, bmo-miR-8*, bmo-miR-13a*, bmo-miR-46*, bmo-miR-263*, bmo-miR-279*, and bmo-miR-305*. [score:1]
Examining the positions of the identified miRNAs in the B. mori genome, we identified two miRNA clusters (Figure 4): bmo-miR-2a-1/bmo-miR-2a-1*/bmo-miR-2a-2/bmo-miR-2b/bmo-miR-13a*/bmo-miR-13b; and bmo-miR-275/bmo-miR-305/bmo-miR-305*. [score:1]
The cluster bmo-miR-275/bmo-miR-305/bmo-miR-305* is also found in D. melanogaster, D. pseudoobscura and A. gambiae. [score:1]
a. bmo-miR-2a-1/bmo-miR-2a-1*/bmo-miR-2a-2/bmo-miR-2b/bmo-miR-13a*/bmo-miR-13b; b. bmo-miR-275/bmo-miR-305/bmo-miR-305*. [score:1]
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[+] score: 5
The tiling array evidence we accumulated also suggests that mir-305 is expressed. [score:3]
The SLS output contained five predictions with significant similarity to the HOM output (ame-mir-13a, ame-mir-276, ame-mir-305, ame-mir-92 and ame-mir-9a) and only two predictions with significant similarity to the top 25 MCE candidates, both of which were variants of C5152. [score:1]
Other examples of clustered miRNAs or multicopy miRNAs include: novel miRNA C5152a antisense to C5152b; novel C5303 overlapping ame-mir-137; ame-mir-9b overlapping the ame-mir-79 locus, but on the opposite strand; ame-mir-12 near ame-mir-283; ame-mir-275 near ame-mir-305; ame-mir-277 near ame-mir-317 and ame-mir-34; C1504 near ame-mir-375; and ame-let-7 on the same scaffold as ame-mir-100. [score:1]
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[+] score: 4
Distribution of targets for maternal and zygotic transcripts for mir-305 (both arms are highly present in the egg) and mir-4986 (gray box, neither of the arms was detected in the egg). [score:3]
Both arms of mir-305 are present at high levels in unfertilized eggs. [score:1]
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[+] score: 3
Presumptive polyadenylation sites (*) and the miR305-target (miR) in the 3’UTR of H are indicated. [score:3]
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[+] score: 2
Drosophila miR-305 acts on the Notch and Insulin signaling pathways in intestinal stems cells to place symmetric versus asymmetric stem cell division under nutritional control (Foronda et al., 2014). [score:1]
Coordination of insulin and Notch pathway activities by microRNA miR-305 mediates adaptive homeostasis in the intestinal stem cells of the Drosophila gut. [score:1]
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[+] score: 1
And ten pre-miRNAs also predicted mature parts on the star (*) arm (mir-305, mir-79, let-7, mir-2a-2, mir-8, mir-7, mir-9a, mir-316, mir-34, mir-12). [score:1]
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[+] score: 1
The maternal loading of NFE involves conserved miRNAs such as let-7, Bantam, Mir-34, Mir-305, Mir-8, Mir-71 and Mir-1, all of which play roles in basic biological functions [6], as well as large amounts of MIR-bg5 miRNAs. [score:1]
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[+] score: 1
Other miRNAs from this paper: dme-mir-34, dme-let-7
We first confirmed the effects of Nbr on miRNAs, such as miR-34-5p and miR-305-5p in the ovary libraries. [score:1]
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[+] score: 1
P. tepidariorum also contains panarthropod (mir-276 and mir-305), arthropod (iab-4/8 and mir-275), and chelicerate-specific (mir-3931) microRNAs (Rota-Stabelli et al. 2011; Tarver et al. 2013). [score:1]
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