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4 publications mentioning mtr-MIR396a

Open access articles that are associated with the species Medicago truncatula and mention the gene name MIR396a. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 9
Other miRNAs from this paper: mtr-MIR160a, mtr-MIR166a, mtr-MIR169a, mtr-MIR399b, mtr-MIR399d, mtr-MIR393a, mtr-MIR395a, mtr-MIR395b, mtr-MIR399c, mtr-MIR399a, mtr-MIR399e, mtr-MIR156a, mtr-MIR171a, mtr-MIR395c, mtr-MIR395d, mtr-MIR395e, mtr-MIR395f, mtr-MIR395g, mtr-MIR395h, mtr-MIR395i, mtr-MIR395j, mtr-MIR395l, mtr-MIR395m, mtr-MIR395n, mtr-MIR395o, mtr-MIR395k, mtr-MIR156b, mtr-MIR167a, mtr-MIR164a, mtr-MIR160b, mtr-MIR166b, mtr-MIR160c, mtr-MIR169c, mtr-MIR169d, mtr-MIR169e, mtr-MIR171b, mtr-MIR166c, mtr-MIR166d, mtr-MIR169f, mtr-MIR156c, mtr-MIR156d, mtr-MIR390, mtr-MIR399f, mtr-MIR399g, mtr-MIR399h, mtr-MIR399i, mtr-MIR399j, mtr-MIR399k, mtr-MIR166e, mtr-MIR156e, mtr-MIR171c, mtr-MIR393b, mtr-MIR169g, mtr-MIR156f, mtr-MIR399l, mtr-MIR156g, mtr-MIR399m, mtr-MIR399n, mtr-MIR399o, mtr-MIR164b, mtr-MIR156h, mtr-MIR166f, mtr-MIR160d, mtr-MIR164c, mtr-MIR164d, mtr-MIR166g, mtr-MIR171d, mtr-MIR171e, mtr-MIR396b, mtr-MIR169h, mtr-MIR169b, mtr-MIR156i, mtr-MIR171f, mtr-MIR160e, mtr-MIR399p, mtr-MIR1507, mtr-MIR1509a, mtr-MIR2118, mtr-MIR169k, mtr-MIR2590a, mtr-MIR2590b, mtr-MIR2590c, mtr-MIR2590d, mtr-MIR2590e, mtr-MIR2590f, mtr-MIR2592b, mtr-MIR2592c, mtr-MIR2592d, mtr-MIR2592e, mtr-MIR2592f, mtr-MIR2592i, mtr-MIR2592j, mtr-MIR2592o, mtr-MIR2592p, mtr-MIR2592q, mtr-MIR2592r, mtr-MIR2592s, mtr-MIR2597, mtr-MIR2111c, mtr-MIR2111d, mtr-MIR2111e, mtr-MIR2111g, mtr-MIR2111h, mtr-MIR2111i, mtr-MIR2111m, mtr-MIR2111n, mtr-MIR2111o, mtr-MIR2610a, mtr-MIR2610b, mtr-MIR169j, mtr-MIR1509b, mtr-MIR2619a, mtr-MIR2592a, mtr-MIR2592g, mtr-MIR2592h, mtr-MIR2592k, mtr-MIR2592l, mtr-MIR2592m, mtr-MIR2592n, mtr-MIR2111b, mtr-MIR2111j, mtr-MIR2111k, mtr-MIR2630a, mtr-MIR2630b, mtr-MIR2630c, mtr-MIR2630w, mtr-MIR2630x, mtr-MIR2630y, mtr-MIR2630d, mtr-MIR2630e, mtr-MIR2630f, mtr-MIR2630g, mtr-MIR2630h, mtr-MIR2630i, mtr-MIR2630j, mtr-MIR2630k, mtr-MIR2630l, mtr-MIR2630m, mtr-MIR2630n, mtr-MIR2630o, mtr-MIR2630p, mtr-MIR2630q, mtr-MIR2630r, mtr-MIR2630s, mtr-MIR2630t, mtr-MIR2630u, mtr-MIR2630v, mtr-MIR2645, mtr-MIR399q, mtr-MIR5205a, mtr-MIR5205b, mtr-MIR5205c, mtr-MIR5205d, mtr-MIR2592t, mtr-MIR2592u, mtr-MIR2592v, mtr-MIR2592w, mtr-MIR2592x, mtr-MIR2592y, mtr-MIR2592z, mtr-MIR2592ab, mtr-MIR2592ac, mtr-MIR2592ad, mtr-MIR2592ae, mtr-MIR2592af, mtr-MIR2592ah, mtr-MIR2592ai, mtr-MIR2592aj, mtr-MIR2592al, mtr-MIR2592am, mtr-MIR2592an, mtr-MIR2592ao, mtr-MIR2592ap, mtr-MIR2592aq, mtr-MIR2592ar, mtr-MIR2592as, mtr-MIR2592at, mtr-MIR2592au, mtr-MIR2592av, mtr-MIR2592aw, mtr-MIR2592ax, mtr-MIR2592ay, mtr-MIR2592az, mtr-MIR2592ba, mtr-MIR2592bb, mtr-MIR2592bc, mtr-MIR2592bd, mtr-MIR2592be, mtr-MIR2592bf, mtr-MIR2592bg, mtr-MIR2592bi, mtr-MIR2592bj, mtr-MIR2592bk, mtr-MIR482, mtr-MIR5241a, mtr-MIR5241b, mtr-MIR5241c, mtr-MIR2111l, mtr-MIR2111f, mtr-MIR160f, mtr-MIR171h, mtr-MIR399r, mtr-MIR156j, mtr-MIR2590g, mtr-MIR5283, mtr-MIR2590h, mtr-MIR2590i, mtr-MIR2590j, mtr-MIR5287a, mtr-MIR5287b, mtr-MIR2619b, mtr-MIR2592bl, mtr-MIR2592bm, mtr-MIR2592bn, mtr-MIR167b, mtr-MIR2111a, mtr-MIR396c, mtr-MIR171g, mtr-MIR530, mtr-MIR169i, mtr-MIR397, mtr-MIR7696a, mtr-MIR7696b, mtr-MIR7696c, mtr-MIR7696d, mtr-MIR169l, mtr-MIR399s, mtr-MIR399t, mtr-MIR2592bo, mtr-MIR2592bp, mtr-MIR2592bq, mtr-MIR2592br
Other miRNAs, like miR164, miR166 or miR396, were shown to play indirect roles in nodule development or mycorrhizal symbiosis due to their global impact on auxin responses and/or tissue patterning in roots [13– 15]. [score:3]
Again, certain miRNAs already known to be involved in the regulation of symbiotic and pathogenic processes, such as miR169 variants [20], miR171h and other variants [22, 23], miR393 [16], miR396 [15], sly-miR482* and miR2118 [19], were found, suggesting co-regulatory roles for the newly discovered miRNAs present in those modules. [score:3]
Differentially conserved miRNAs, already known to be involved in the regulation of symbiotic processes, belong to each module, such as miR164a variant [13], miR166a variant [14], miR169 and miR396. [score:2]
To date, only few miRNAs have known functions in the root apical meristem - for example, ath-miR160 involved in root cap differentiation and stem cell niche maintenance in A. thaliana and M. truncatula [64, 65], and mtr-miR396, which restricts root growth and meristematic cell proliferation in M. truncatula [28]. [score:1]
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2
[+] score: 7
Other miRNAs from this paper: mtr-MIR166a, mtr-MIR169a, mtr-MIR399b, mtr-MIR399d, mtr-MIR399c, mtr-MIR399a, mtr-MIR399e, mtr-MIR156a, mtr-MIR171a, mtr-MIR156b, mtr-MIR164a, mtr-MIR166b, mtr-MIR169c, mtr-MIR169d, mtr-MIR169e, mtr-MIR171b, mtr-MIR166c, mtr-MIR166d, mtr-MIR169f, mtr-MIR156c, mtr-MIR156d, mtr-MIR399f, mtr-MIR399g, mtr-MIR399h, mtr-MIR399i, mtr-MIR399j, mtr-MIR399k, mtr-MIR166e, mtr-MIR156e, mtr-MIR171c, mtr-MIR398a, mtr-MIR398b, mtr-MIR169g, mtr-MIR156f, mtr-MIR399l, mtr-MIR156g, mtr-MIR399m, mtr-MIR399n, mtr-MIR399o, mtr-MIR398c, mtr-MIR164b, mtr-MIR156h, mtr-MIR166f, mtr-MIR164c, mtr-MIR164d, mtr-MIR166g, mtr-MIR171d, mtr-MIR171e, mtr-MIR396b, mtr-MIR169h, mtr-MIR169b, mtr-MIR156i, mtr-MIR171f, mtr-MIR399p, mtr-MIR2086, mtr-MIR1510b, mtr-MIR1507, mtr-MIR1510a, mtr-MIR2089, mtr-MIR2118, mtr-MIR169k, mtr-MIR2111c, mtr-MIR2111d, mtr-MIR2111e, mtr-MIR2111g, mtr-MIR2111h, mtr-MIR2111i, mtr-MIR2111m, mtr-MIR2111n, mtr-MIR2111o, mtr-MIR169j, mtr-MIR2111b, mtr-MIR2111j, mtr-MIR2111k, mtr-MIR2630a, mtr-MIR2630b, mtr-MIR2630c, mtr-MIR2630w, mtr-MIR2630x, mtr-MIR2630y, mtr-MIR2630d, mtr-MIR2630e, mtr-MIR2630f, mtr-MIR2630g, mtr-MIR2630h, mtr-MIR2630i, mtr-MIR2630j, mtr-MIR2630k, mtr-MIR2630l, mtr-MIR2630m, mtr-MIR2630n, mtr-MIR2630o, mtr-MIR2630p, mtr-MIR2630q, mtr-MIR2630r, mtr-MIR2630s, mtr-MIR2630t, mtr-MIR2630u, mtr-MIR2630v, mtr-MIR399q, mtr-MIR4414a, mtr-MIR2111l, mtr-MIR2111f, mtr-MIR171h, mtr-MIR399r, mtr-MIR156j, mtr-MIR5554a, mtr-MIR5274b, mtr-MIR5558, mtr-MIR408, mtr-MIR2111a, mtr-MIR396c, mtr-MIR171g, mtr-MIR169i, mtr-MIR169l, mtr-MIR399s, mtr-MIR399t
Conversely, 10 members belonging to 6 miRNA families, i. e., miR164, miR169, miR171, miR396, miR398 and miR1510, were down-regulated in response to drought stress (Figure 3b and 3c). [score:4]
In the present study, we found that the known or predicted targets of miR164, miR169, miR171, miR396, miR1510 and miR5558 were either transcription factors or F-box proteins (Table 3, 4). [score:3]
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3
[+] score: 6
Other miRNAs from this paper: osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR169a, osa-MIR171a, osa-MIR393a, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR397a, osa-MIR397b, osa-MIR398a, osa-MIR398b, osa-MIR399a, osa-MIR399b, osa-MIR399c, osa-MIR399d, osa-MIR399e, osa-MIR399f, osa-MIR399g, osa-MIR399h, osa-MIR399i, osa-MIR399j, osa-MIR399k, osa-MIR156k, osa-MIR156l, osa-MIR166k, osa-MIR166l, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR168a, osa-MIR168b, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR171b, osa-MIR171c, osa-MIR171d, osa-MIR171e, osa-MIR171f, osa-MIR171g, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR171h, osa-MIR393b, osa-MIR408, osa-MIR172d, osa-MIR171i, osa-MIR167j, osa-MIR166m, osa-MIR166j, osa-MIR396e, mtr-MIR166a, mtr-MIR169a, mtr-MIR399b, mtr-MIR399d, mtr-MIR393a, mtr-MIR399c, mtr-MIR399a, mtr-MIR399e, mtr-MIR156a, mtr-MIR171a, mtr-MIR156b, mtr-MIR167a, mtr-MIR166b, mtr-MIR169c, mtr-MIR169d, mtr-MIR169e, mtr-MIR171b, mtr-MIR166c, mtr-MIR166d, mtr-MIR169f, mtr-MIR156c, mtr-MIR156d, mtr-MIR399f, mtr-MIR399g, mtr-MIR399h, mtr-MIR399i, mtr-MIR399j, mtr-MIR399k, mtr-MIR166e, mtr-MIR156e, mtr-MIR171c, mtr-MIR398a, mtr-MIR172a, mtr-MIR393b, mtr-MIR398b, mtr-MIR168a, mtr-MIR169g, mtr-MIR156f, mtr-MIR399l, mtr-MIR156g, mtr-MIR399m, mtr-MIR399n, mtr-MIR399o, mtr-MIR398c, mtr-MIR156h, mtr-MIR166f, mtr-MIR166g, mtr-MIR171d, mtr-MIR171e, mtr-MIR396b, mtr-MIR169h, mtr-MIR169b, mtr-MIR156i, mtr-MIR171f, mtr-MIR399p, osa-MIR169r, sly-MIR166a, sly-MIR166b, sly-MIR167a, sly-MIR169a, sly-MIR169b, sly-MIR169c, sly-MIR169d, sly-MIR171a, sly-MIR171b, sly-MIR171c, sly-MIR171d, sly-MIR397, sly-MIR156a, sly-MIR156b, sly-MIR156c, sly-MIR172a, sly-MIR172b, sly-MIR399, osa-MIR827, osa-MIR396f, mtr-MIR2118, osa-MIR2118a, osa-MIR2118b, osa-MIR2118c, osa-MIR2118d, osa-MIR2118e, osa-MIR2118f, osa-MIR2118g, osa-MIR2118h, osa-MIR2118i, osa-MIR2118j, osa-MIR2118k, osa-MIR2118l, osa-MIR2118m, osa-MIR2118n, osa-MIR2118o, osa-MIR2118p, osa-MIR2118q, osa-MIR2118r, mtr-MIR169k, mtr-MIR169j, mtr-MIR399q, osa-MIR396g, osa-MIR396h, osa-MIR396d, osa-MIR5072, mtr-MIR4414a, mtr-MIR4414b, mtr-MIR482, mtr-MIR172b, mtr-MIR172c, mtr-MIR171h, mtr-MIR168b, mtr-MIR399r, mtr-MIR156j, sly-MIR482e, sly-MIR482a, mtr-MIR167b, mtr-MIR168c, mtr-MIR408, mtr-MIR396c, mtr-MIR171g, stu-MIR6024, sly-MIR6024, stu-MIR482c, stu-MIR482b, stu-MIR482a, stu-MIR482d, stu-MIR482e, sly-MIR482b, sly-MIR482c, stu-MIR6025, stu-MIR6026, sly-MIR6026, sly-MIR168a, sly-MIR168b, mtr-MIR169i, mtr-MIR172d, mtr-MIR397, mtr-MIR169l, mtr-MIR399s, mtr-MIR399t, stu-MIR7980a, stu-MIR7983, stu-MIR8007a, stu-MIR8007b, stu-MIR7980b, stu-MIR399a, stu-MIR399b, stu-MIR399c, stu-MIR399d, stu-MIR399e, stu-MIR399f, stu-MIR399g, stu-MIR399h, stu-MIR3627, stu-MIR171b, stu-MIR166a, stu-MIR166b, stu-MIR166c, stu-MIR166d, stu-MIR171a, stu-MIR171c, stu-MIR399i, stu-MIR827, stu-MIR172b, stu-MIR172c, stu-MIR172a, stu-MIR172d, stu-MIR172e, stu-MIR156a, stu-MIR156b, stu-MIR156c, stu-MIR156d, stu-MIR171d, stu-MIR167c, stu-MIR167b, stu-MIR167a, stu-MIR167d, stu-MIR399j, stu-MIR399k, stu-MIR399l, stu-MIR399m, stu-MIR399n, stu-MIR399o, stu-MIR393, stu-MIR398a, stu-MIR398b, stu-MIR396, stu-MIR408a, stu-MIR408b, stu-MIR397, stu-MIR171e, stu-MIR156e, stu-MIR156f, stu-MIR156g, stu-MIR156h, stu-MIR156i, stu-MIR156j, stu-MIR156k, stu-MIR169a, stu-MIR169b, stu-MIR169c, stu-MIR169d, stu-MIR169e, stu-MIR169f, stu-MIR169g, stu-MIR169h, sly-MIR403, sly-MIR166c, sly-MIR156d, sly-MIR156e, sly-MIR396a, sly-MIR167b, sly-MIR482d, sly-MIR169e, sly-MIR396b, sly-MIR171e, sly-MIR172c, sly-MIR408, sly-MIR172d, sly-MIR827, sly-MIR393, sly-MIR398a, sly-MIR399b, sly-MIR6025, sly-MIR169f, sly-MIR171f
Two following studies then revealed that M. trunctula miR396 and miR171h regulate root architecture and symbiosis with AM fungi by respectively targeting growth -regulating factor gene (MtGRF) and Nodulation Signaling Pathway2 (NSP2) gene (Lauressergues et al., 2012; Bazin et al., 2013). [score:5]
miR396 affects mycorrhization and root meristem activity in the legume Medicago truncatula. [score:1]
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4
[+] score: 1
However, at the SSR loci level, only one SSR locus in pri-MIR396a was found to be similar to its homologous EST sequence, meaning that 168 of the 169 (99.41%) Mt-miRNA-SSR markers developed in our study are all novel. [score:1]
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