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12 publications mentioning tae-MIR444a

Open access articles that are associated with the species Triticum aestivum and mention the gene name MIR444a. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 34
Expression of some conserved miRNA families such as miR156 and miR6213 has been detected as upregulated while miR168, miR444, and miR5048 have shown suppressed expression patterns in response to salinity stress in barley (Lv et al. 2012; Deng et al. 2015). [score:10]
For example, miR444 was upregulated in the third hour of stress but downregulated at 8 and 27 h (Deng et al. 2015). [score:7]
Overexpression of miR444 induced primary root growth and caused the inhibition of lateral root propagation in rice (Yan et al. 2014). [score:5]
In another study, the upregulation of miR444a in roots and leaves of wheat in response to nitrogen deficiency was demonstrated (Gao et al. 2016). [score:4]
Overexpression of the same miRNA in tobacco improved plant growth and biomass along with increased N uptake under N deficiency and suggested that miR444a acts as a regulator of nitrate transporters (Gao et al. 2016). [score:4]
Based on these results, it is plausible to suggest that miR444a regulates N metabolism via N transporters and manipulation of this miRNA has potential to improve crop performance under N -deficient conditions. [score:2]
durum, H. vulgare Cu -binding domain containing chemocyanin and blue copper proteinLiu et al. 2015a, Kantar et al. 2010 miR444 H. vulgare –Hackenberg et al. 2014, Ma et al. 2015 miR474 T. turgidum ssp. [score:1]
Based on these studies, it will be interesting to further characterize miR444 expression and function under salt stress conditions. [score:1]
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2
[+] score: 19
Other miRNAs from this paper: tae-MIR444b
Identification of differentially expressed microRNA of Triticum aestivum inoculated with Azospirillum brasilenseFifteen wheat microRNAs were found in the RNASeq data, and one of them, tae-MIR444, was up-regulated in the colonized roots (8.6-fold, p-value 0.019) (Additional file 4: Table S3). [score:6]
One other possible target for MIR444 is an homolog of A. thaliana regulatory factor ANR1, which is a MADS box transcriptional factor that promotes lateral roots elongation in response to nitrate supply [19, 20]. [score:4]
Fifteen wheat microRNAs were found in the RNASeq data, and one of them, tae-MIR444, was up-regulated in the colonized roots (8.6-fold, p-value 0.019) (Additional file 4: Table S3). [score:4]
MIR444 and its predicted target, MADS box transcriptional factors, are conserved in monocots. [score:3]
Further investigation is required to determine the possible role of MIR444 up-regulation in colonized roots. [score:2]
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3
[+] score: 16
In rice, OsMADS57 is involved in axillary bud development and regulation of tillering through down-regulation of miR444a [69]. [score:6]
Since the miRNA variants from miR444 family are functional, and MADS-box genes are collectively regulated by the miR444 family [70], we suggest that apMir_19892 may mediate flowering through the regulation of MIKC-type MADS-box transcription factor gene expression. [score:5]
In barley, this target contains both the target site for miR444b and the precursor sequence for miR444a [68]). [score:5]
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4
[+] score: 9
Some of the conserved miRNAs differentially expressed in response to powdery mildew infection in wheat such as miR156, miR159, miR164, miR171, and miR396 were downregulated whereas miR393, miR444, and miR827 were upregulated, respectively [16]. [score:9]
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5
[+] score: 7
Other cold responsive miRNAs, MiR319 and miR444, targeted TCP and MADS-box genes were involved flower development [51, 52]. [score:4]
MiR444 regulates the MADs-box genes, especially in monocot species, and has been demonstrated to regulate flower development [78]. [score:3]
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6
[+] score: 5
Other miRNAs from this paper: osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR160a, osa-MIR160b, osa-MIR160c, osa-MIR160d, osa-MIR164a, osa-MIR164b, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR169a, osa-MIR171a, osa-MIR393a, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR397a, osa-MIR397b, osa-MIR399a, osa-MIR399b, osa-MIR399c, osa-MIR399d, osa-MIR399e, osa-MIR399f, osa-MIR399g, osa-MIR399h, osa-MIR399i, osa-MIR399j, osa-MIR399k, osa-MIR156k, osa-MIR156l, osa-MIR159a, osa-MIR159b, osa-MIR159c, osa-MIR159d, osa-MIR159e, osa-MIR159f, osa-MIR319a, osa-MIR319b, osa-MIR160e, osa-MIR160f, osa-MIR164c, osa-MIR164d, osa-MIR164e, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR168a, osa-MIR168b, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR171b, osa-MIR171c, osa-MIR171d, osa-MIR171e, osa-MIR171f, osa-MIR171g, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR171h, osa-MIR393b, osa-MIR408, osa-MIR172d, osa-MIR171i, osa-MIR167j, osa-MIR164f, osa-MIR390, osa-MIR439a, osa-MIR439b, osa-MIR439c, osa-MIR439d, osa-MIR439e, osa-MIR439f, osa-MIR439g, osa-MIR439h, osa-MIR439i, osa-MIR396e, osa-MIR444a, tae-MIR159a, tae-MIR159b, tae-MIR160, tae-MIR164, tae-MIR167a, tae-MIR171a, tae-MIR399, tae-MIR408, osa-MIR169r, osa-MIR444b, osa-MIR444c, osa-MIR444d, osa-MIR444e, osa-MIR444f, osa-MIR396f, osa-MIR396g, osa-MIR396h, osa-MIR396d, tae-MIR156, tae-MIR319, tae-MIR167b, tae-MIR169, tae-MIR444b, tae-MIR171b, tae-MIR396, tae-MIR167c, tae-MIR397
Twelve conserved miRNA families (miR156/157, miR159/319, miR160, miR164, miR165/166, miR167, miR169, miR170/171, miR172 and miR444) have been predicted to target 24 transcription factors, including squamosa promoter binding proteins, MYB, NAC1, homeodomain-leucine zipper protein, auxin response factor, CCAAT -binding protein, scarecrow-like protein, APETELA2 protein and MADS box protein (Additional data file 2). [score:3]
This analysis revealed perfect matching of nine miRNA families, miR159, miR160, miR164, miR167, miR169, miR170, miR399, miR408 and miR444, to 14 ESTs. [score:1]
In addition, we also found miR444 in a wheat small RNA library; miR444 is a monocot-specific miRNA [45]. [score:1]
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7
[+] score: 4
For 13 highly conserved miRNA families differentially expressed in wheat grain development (Fig 3), five (miR165/166, miR171, miR393, miR396 and miR444), three (miR156, miR164 and miR168), two (miR319 and miR827), one (miR408) and two miRNAs (miR159 and miR167) belonged to Group I, II, III, IV and V, respectively. [score:4]
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8
[+] score: 4
Other miRNAs from this paper: osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR162a, osa-MIR164a, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR394, osa-MIR395b, osa-MIR395d, osa-MIR395e, osa-MIR395g, osa-MIR395h, osa-MIR395i, osa-MIR395j, osa-MIR395k, osa-MIR395l, osa-MIR395s, osa-MIR395t, osa-MIR395c, osa-MIR395a, osa-MIR395f, osa-MIR395u, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR397a, osa-MIR397b, osa-MIR398a, osa-MIR398b, osa-MIR399a, osa-MIR399b, osa-MIR399c, osa-MIR399d, osa-MIR399e, osa-MIR399f, osa-MIR399g, osa-MIR399h, osa-MIR399i, osa-MIR399j, osa-MIR399k, osa-MIR156k, osa-MIR156l, osa-MIR159b, osa-MIR162b, osa-MIR166k, osa-MIR166l, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR168a, osa-MIR168b, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR408, osa-MIR172d, osa-MIR167j, osa-MIR166m, osa-MIR166j, osa-MIR437, osa-MIR396e, osa-MIR444a, osa-MIR528, osa-MIR529a, osa-MIR395m, osa-MIR395n, osa-MIR395o, osa-MIR395p, osa-MIR395q, osa-MIR395v, osa-MIR395w, osa-MIR395r, osa-MIR529b, tae-MIR159b, tae-MIR167a, tae-MIR399, tae-MIR408, osa-MIR1432, osa-MIR444b, osa-MIR444c, osa-MIR444d, osa-MIR444e, osa-MIR444f, osa-MIR1848, osa-MIR1858a, osa-MIR1858b, osa-MIR1862a, osa-MIR1862b, osa-MIR1862c, osa-MIR1871, osa-MIR1862d, osa-MIR1862e, osa-MIR827, osa-MIR396f, osa-MIR396g, osa-MIR396h, osa-MIR396d, osa-MIR395x, osa-MIR395y, hvu-MIR156a, tae-MIR156, hvu-MIR159b, hvu-MIR166a, tae-MIR167b, hvu-MIR168, tae-MIR395a, tae-MIR395b, hvu-MIR397a, tae-MIR398, tae-MIR444b, hvu-MIR166b, hvu-MIR444a, osa-MIR1862f, osa-MIR1862g, hvu-MIR399, hvu-MIR444b, hvu-MIR166c, tae-MIR396, tae-MIR167c, tae-MIR397, hvu-MIR397b, hvu-MIR156b
On the other hand, there is clear evidence of expression of members of the miR444 family in all species considered here. [score:2]
In addition to miRNA families conserved between the dicots and monocots, Jones-Rhoades et al. [2] noted that miR437, miR444 and miR445 have members in rice and maize, but not in Arabidopsis. [score:1]
Two sequences labelled as miR2024b and miR2024a [33] are actually identical to sequences labelled miR444b and miR444c in the same work, respectively, so we include them as part of the miR444 family. [score:1]
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9
[+] score: 3
We employed a gene-specific 5′-rapid amplification of cDNA ends (RACE) assay to isolate cleavage remnants for 15 target genes, including 2 SPL genes for miR156, 1 ARF gene for miR160, 2 NAC genes for miR164, 2 HOMEOBOX-LEUCINE ZIPPER genes for miR166, 5 genes encoding nuclear transcription factor Y subunit A proteins for miR169, 1 scarecrow-like protein gene for miR171 and 1 AP2 gene for miR172, and 1 gene encoding a C3HC4 type zinc finger protein that was regulated by miR444 in wheat. [score:3]
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10
[+] score: 3
Furthermore, the expression patters of many abiotic/biotic stress relative miRNAs have been sharply changed in this paper (S2 Table), such as miR169 [65], miR444 [66], miR1511 [67], miR5139 [20] and miR5368 [68] which were related to nitrogen-starvation responses, dehydration stress response, microbes response, ethylene, water deficit and rust-stress responses, respectively. [score:3]
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11
[+] score: 1
Group 1 contained 8 miRNAs, among which, 3 (miR2001, miR2006, miR2011) were decreased, and 5 others (miR393, miR444, miR827, miR2005 and miR2013) were increased after powdery mildew infection in JD8. [score:1]
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12
[+] score: 1
Gupta et al. (2012a) reported that miR167, miR171, miR444, miR1129, and miR1138 are players in resistance of wheat against rust. [score:1]
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