4 publications mentioning mes-MIR168a

Open access articles that are associated with the species Manihot esculenta and mention the gene name MIR168a. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1

It also binds to miR168, which targets its own mRNA for repression, establishing a homeostatic regulatory loop.

0147251.g009 Fig 9 The miR168 family, targeting AGO1, was also identified in cassava in this study.

0147251.g009 Fig 9The miR168 family, targeting AGO1, was also identified in cassava in this study.

Ten families (miR162, miR164, miR167, miR168, miR169, miR172, miR393, miR399 and miR827) are present in all angiosperm lineages (Fig 8).

2

For instance, the degrees of up-regulation of miRNA-168 (i. e., miRNA-168.1) and the two half-phased miRNA-like RNAs from pre-miR168 (i. e., miR-168.2 and miR-168.3) were all greater in SC124 than in C4 under the three cold treatments.

This property of half-phased miRNA-like RNAs is conserved beyond Euphorbia, as shown by the examples of half-phased miRNA-like RNAs derived from miR168′s precursor in Arabidopsis and rice (Fig.   1b).

Type miRNA Sequence of RNA-seq Sequence by PCR cloning validation Novel ARF1 TTCTTGACCTTGTAAGACCTT TTCTTGACCTTGTAAGA ∽ Novel ARF2 TTCTTGACCTTGTAAGACCCC TTCTTGACCTTGTAAGACCCC √ Novel D8+ CCATACTTTGAATTGTGGAAG CCATACTTTGAATTGTGGAAG √ Known miR168.1 TCGCTTGGTGCAGGTCGGGAA × Half-phase miR168.2 TGCATCAACTGAATCGGAGAC TGCATCAACTGAATCGGAGAC √ Half-phase miR168.3 TGGATCCCGCCTTGCATCAAC TGGATCCCGCCTTGCATCAAC √ Half-phase miR171d.

2, miR168.2, miR168.3, miR171d.

Examples of half-phased miRNA-like RNAs include cassava pre-miR168 and pre-miR390b are shown in Fig.   1b and Figure  S1B, respectively.

3

Non-phasing ta-siRNAs have also been observed in Arabidopsis, where RDR6 -dependent siRNAs derived from miRNA target loci (e. g. miR168 at AGO1, miR472 at several CC-NBS-LRR genes) were found not to be arranged in a phasing pattern either [16].

Another 10 annotated miRNA families – miR159, miR162, miR164, miR167, miR168, miR169, miR172, miR393, miR396, and miR398 – were also conserved in at least eight species (Table  2).

4

Meanwhile, ten miRNA families were more highly expressed in the storage roots of wild progenitor W14; these included miR168, miR171abcdefghi, miR2950, miR393ab, miR396c, new-3, new-8, new-11 and new-34 (Table  3).