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5 publications mentioning stu-MIR399h

Open access articles that are associated with the species Solanum tuberosum and mention the gene name MIR399h. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 29
The NIa-Pro gene was observed to be attacked by 18 different miRNAs; only three of the above-mentioned miRNAs targeted the gene at multiple loci, while the other 15 miRNAs (miR166c-3p, miR166d-5p, miR1886b, miR1886c, miR395a, miR395b, miR395i, miR395j, miR399h, miR7992-5p, miR8000, miR8006-5p, miR8007a-5p, miR8011a-5p, miR8018, and miR8033-3p) targeted at a single locus as shown in Figure 5. Figure 6miRNA families and the number of putative targets to the NIa-Pro gene of Potato Virus Y (PVY). [score:7]
The NIa-Pro gene was observed to be attacked by 18 different miRNAs; only three of the above-mentioned miRNAs targeted the gene at multiple loci, while the other 15 miRNAs (miR166c-3p, miR166d-5p, miR1886b, miR1886c, miR395a, miR395b, miR395i, miR395j, miR399h, miR7992-5p, miR8000, miR8006-5p, miR8007a-5p, miR8011a-5p, miR8018, and miR8033-3p) targeted at a single locus as shown in Figure 5. Figure 6miRNA families and the number of putative targets to the NIa-Pro gene of Potato Virus Y (PVY). [score:7]
Other than these four miRNAs, miR160a-5p, miR395a, miR395b, miR395i, miR395j, miR399h, miR399l-5p, miR408a-3p, miR482d-5p, miR8000, miR8004, miR8006-3p, miR8032b-3p, miR8032d-3p, and miR8032f-3p targeted the HC-Pro gene at a single locus. [score:3]
It is also important to mention that five miRNAs (miR160a-5p, miR7997b, miR166c-3p, miR399h, and miR5303d) could target the CI, NIb, HC-Pro, NIa-Pro, CP, and VPg genes of PVY at multiple loci. [score:3]
In this study, we found 19 miRNAs (miR164-3p, miR166c-3p, miR171a-3p, miR171d-3p, miR160a-5p, miR395a, miR395b, miR395i, miR395j, miR399h, miR399l-5p, miR408a-3p, miR482d-5p, miR8000, miR8004, miR8006-3p, miR8032b-3p, miR8032d-3p, and miR8032f-3p) that potentially targeted the HC-Pro (helper component proteinase) gene. [score:3]
The other three miRNAs (miR6149-3p, miR8006-3p, and miR8032b-3p) targeted the CP gene at two different positions (Figure 6), and remaining eight miRNAs (miR156d-3p, miR164-3p, miR167b-3p, miR399h, miR399l-5p, miR7996c, miR8004, and miR8032d-3p) attached at a single position. [score:3]
On the one hand, we have short-listed 5 miRNAs (miR160a-5p, miR7997b, miR166c-3p, miR399h, and miR5303d) that could target the genes of PVY at multiple loci. [score:3]
[1 to 20 of 7 sentences]
2
[+] score: 10
Other miRNAs from this paper: osa-MIR156a, osa-MIR156b, osa-MIR156c, osa-MIR156d, osa-MIR156e, osa-MIR156f, osa-MIR156g, osa-MIR156h, osa-MIR156i, osa-MIR156j, osa-MIR166a, osa-MIR166b, osa-MIR166c, osa-MIR166d, osa-MIR166e, osa-MIR166f, osa-MIR167a, osa-MIR167b, osa-MIR167c, osa-MIR169a, osa-MIR171a, osa-MIR393a, osa-MIR396a, osa-MIR396b, osa-MIR396c, osa-MIR397a, osa-MIR397b, osa-MIR398a, osa-MIR398b, osa-MIR399a, osa-MIR399b, osa-MIR399c, osa-MIR399d, osa-MIR399e, osa-MIR399f, osa-MIR399g, osa-MIR399h, osa-MIR399i, osa-MIR399j, osa-MIR399k, osa-MIR156k, osa-MIR156l, osa-MIR166k, osa-MIR166l, osa-MIR167d, osa-MIR167e, osa-MIR167f, osa-MIR167g, osa-MIR167h, osa-MIR167i, osa-MIR168a, osa-MIR168b, osa-MIR169b, osa-MIR169c, osa-MIR169d, osa-MIR169e, osa-MIR169f, osa-MIR169g, osa-MIR169h, osa-MIR169i, osa-MIR169j, osa-MIR169k, osa-MIR169l, osa-MIR169m, osa-MIR169n, osa-MIR169o, osa-MIR169p, osa-MIR169q, osa-MIR171b, osa-MIR171c, osa-MIR171d, osa-MIR171e, osa-MIR171f, osa-MIR171g, osa-MIR172a, osa-MIR172b, osa-MIR172c, osa-MIR166g, osa-MIR166h, osa-MIR166i, osa-MIR171h, osa-MIR393b, osa-MIR408, osa-MIR172d, osa-MIR171i, osa-MIR167j, osa-MIR166m, osa-MIR166j, osa-MIR396e, mtr-MIR166a, mtr-MIR169a, mtr-MIR399b, mtr-MIR399d, mtr-MIR393a, mtr-MIR399c, mtr-MIR399a, mtr-MIR399e, mtr-MIR156a, mtr-MIR171a, mtr-MIR156b, mtr-MIR167a, mtr-MIR166b, mtr-MIR169c, mtr-MIR169d, mtr-MIR169e, mtr-MIR171b, mtr-MIR166c, mtr-MIR166d, mtr-MIR169f, mtr-MIR156c, mtr-MIR156d, mtr-MIR399f, mtr-MIR399g, mtr-MIR399h, mtr-MIR399i, mtr-MIR399j, mtr-MIR399k, mtr-MIR166e, mtr-MIR156e, mtr-MIR171c, mtr-MIR398a, mtr-MIR172a, mtr-MIR393b, mtr-MIR398b, mtr-MIR168a, mtr-MIR169g, mtr-MIR156f, mtr-MIR399l, mtr-MIR156g, mtr-MIR399m, mtr-MIR399n, mtr-MIR399o, mtr-MIR398c, mtr-MIR156h, mtr-MIR166f, mtr-MIR166g, mtr-MIR171d, mtr-MIR171e, mtr-MIR396a, mtr-MIR396b, mtr-MIR169h, mtr-MIR169b, mtr-MIR156i, mtr-MIR171f, mtr-MIR399p, osa-MIR169r, sly-MIR166a, sly-MIR166b, sly-MIR167a, sly-MIR169a, sly-MIR169b, sly-MIR169c, sly-MIR169d, sly-MIR171a, sly-MIR171b, sly-MIR171c, sly-MIR171d, sly-MIR397, sly-MIR156a, sly-MIR156b, sly-MIR156c, sly-MIR172a, sly-MIR172b, sly-MIR399, osa-MIR827, osa-MIR396f, mtr-MIR2118, osa-MIR2118a, osa-MIR2118b, osa-MIR2118c, osa-MIR2118d, osa-MIR2118e, osa-MIR2118f, osa-MIR2118g, osa-MIR2118h, osa-MIR2118i, osa-MIR2118j, osa-MIR2118k, osa-MIR2118l, osa-MIR2118m, osa-MIR2118n, osa-MIR2118o, osa-MIR2118p, osa-MIR2118q, osa-MIR2118r, mtr-MIR169k, mtr-MIR169j, mtr-MIR399q, osa-MIR396g, osa-MIR396h, osa-MIR396d, osa-MIR5072, mtr-MIR4414a, mtr-MIR4414b, mtr-MIR482, mtr-MIR172b, mtr-MIR172c, mtr-MIR171h, mtr-MIR168b, mtr-MIR399r, mtr-MIR156j, sly-MIR482e, sly-MIR482a, mtr-MIR167b, mtr-MIR168c, mtr-MIR408, mtr-MIR396c, mtr-MIR171g, stu-MIR6024, sly-MIR6024, stu-MIR482c, stu-MIR482b, stu-MIR482a, stu-MIR482d, stu-MIR482e, sly-MIR482b, sly-MIR482c, stu-MIR6025, stu-MIR6026, sly-MIR6026, sly-MIR168a, sly-MIR168b, mtr-MIR169i, mtr-MIR172d, mtr-MIR397, mtr-MIR169l, mtr-MIR399s, mtr-MIR399t, stu-MIR7980a, stu-MIR7983, stu-MIR8007a, stu-MIR8007b, stu-MIR7980b, stu-MIR399a, stu-MIR399b, stu-MIR399c, stu-MIR399d, stu-MIR399e, stu-MIR399f, stu-MIR399g, stu-MIR3627, stu-MIR171b, stu-MIR166a, stu-MIR166b, stu-MIR166c, stu-MIR166d, stu-MIR171a, stu-MIR171c, stu-MIR399i, stu-MIR827, stu-MIR172b, stu-MIR172c, stu-MIR172a, stu-MIR172d, stu-MIR172e, stu-MIR156a, stu-MIR156b, stu-MIR156c, stu-MIR156d, stu-MIR171d, stu-MIR167c, stu-MIR167b, stu-MIR167a, stu-MIR167d, stu-MIR399j, stu-MIR399k, stu-MIR399l, stu-MIR399m, stu-MIR399n, stu-MIR399o, stu-MIR393, stu-MIR398a, stu-MIR398b, stu-MIR396, stu-MIR408a, stu-MIR408b, stu-MIR397, stu-MIR171e, stu-MIR156e, stu-MIR156f, stu-MIR156g, stu-MIR156h, stu-MIR156i, stu-MIR156j, stu-MIR156k, stu-MIR169a, stu-MIR169b, stu-MIR169c, stu-MIR169d, stu-MIR169e, stu-MIR169f, stu-MIR169g, stu-MIR169h, sly-MIR403, sly-MIR166c, sly-MIR156d, sly-MIR156e, sly-MIR396a, sly-MIR167b, sly-MIR482d, sly-MIR169e, sly-MIR396b, sly-MIR171e, sly-MIR172c, sly-MIR408, sly-MIR172d, sly-MIR827, sly-MIR393, sly-MIR398a, sly-MIR399b, sly-MIR6025, sly-MIR169f, sly-MIR171f
Through microarray screening, Gu et al. have found that sly-miR158, sly-miR399h, sly-miR408a, sly-miR827b, and sly-miR399m were differentially expressed in tomato root during AM symbiosis (Gu et al., 2010, 2014). [score:3]
Expression pattern suggests a role of MiR399 in the regulation of the cellular response to local Pi increase during arbuscular mycorrhizal symbiosis. [score:3]
Gu et al found five other miRNAs (sly-miR158, sly-miR399h, sly-miR408a, sly-miR827b, and sly-miR399m) in tomato root were responsive to AM colonization (Gu et al., 2010, 2014). [score:1]
Sly-miR158 and sly-miR408a were not detected in our research, whereas sly-miR399h, sly-miR827b, and sly-miR399m were detected and renamed as miR399b-3p, miR827-3p, and miR399a-3p. [score:1]
Branscheid et al. (2010) first reported the accumulation of miR399 in the roots of M. trunctula and tobacco (Nicotiana tabacum) during AM symbiosis (Branscheid et al., 2010). [score:1]
Five miRNA families (miR399, miR156, miR166, miR171, and miR172) had more than 10 members, and miR156 family, the largest family, had 23 members. [score:1]
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3
[+] score: 6
pho2, a phosphate over accumulator, is caused by a nonsense mutation in a microRNA399 target gene. [score:3]
During phosphate deprivation, miR399 moves from shoots to roots to enhance inorganic phosphate (Pi) uptake and translocation (Lin et al., 2008). [score:1]
Regulatory network of microRNA399 and PHO2 by systemic signaling. [score:1]
Overall, the interaction between miR399 and PHO2 plays a crucial role of in the maintenance of Pi homeostasis. [score:1]
[1 to 20 of 4 sentences]
4
[+] score: 3
On the other hand, potato miR172 and other miRNAs (miR399, miR395) have been shown to be involved in graft transmissible movement through the conductive vascular tissues [20, 47]. [score:1]
The largest families identified were miR399 and miR171 with 12 members each. [score:1]
Similar variations in read abundance were also observed among members of the miRNA families such as miR171 (0.1–1269 TPM), miR164 (0.2–6089 TPM), miR399 (0.5–232 TPM) and miR166 (23888–82963 TPM). [score:1]
[1 to 20 of 3 sentences]
5
[+] score: 2
MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasis. [score:1]
Regulatory network of microRNA399 and PHO2 by systemic signaling. [score:1]
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