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1 publications mentioning mes-MIR11892

Open access articles that are associated with the species Manihot esculenta and mention the gene name MIR11892. Click the [+] symbols to view sentences that include the gene name, or the word cloud on the right for a summary.

1
[+] score: 12
Other miRNAs from this paper: mes-MIR159a, mes-MIR167a, mes-MIR171a, mes-MIR156a, mes-MIR156b, mes-MIR156c, mes-MIR156d, mes-MIR156e, mes-MIR156f, mes-MIR156g, mes-MIR156h, mes-MIR156i, mes-MIR156j, mes-MIR156k, mes-MIR160a, mes-MIR160b, mes-MIR160c, mes-MIR160d, mes-MIR160e, mes-MIR160f, mes-MIR160g, mes-MIR160h, mes-MIR166a, mes-MIR166b, mes-MIR166c, mes-MIR166d, mes-MIR166e, mes-MIR166f, mes-MIR166g, mes-MIR166h, mes-MIR166i, mes-MIR166j, mes-MIR167b, mes-MIR167c, mes-MIR167d, mes-MIR167e, mes-MIR167f, mes-MIR167g, mes-MIR167h, mes-MIR169a, mes-MIR169b, mes-MIR169c, mes-MIR169d, mes-MIR169e, mes-MIR169f, mes-MIR169g, mes-MIR169h, mes-MIR169i, mes-MIR169j, mes-MIR169k, mes-MIR169l, mes-MIR169m, mes-MIR169n, mes-MIR169o, mes-MIR169p, mes-MIR169q, mes-MIR169r, mes-MIR169s, mes-MIR169t, mes-MIR169u, mes-MIR169v, mes-MIR169w, mes-MIR169x, mes-MIR169y, mes-MIR169z, mes-MIR169aa, mes-MIR169ab, mes-MIR169ac, mes-MIR171b, mes-MIR171c, mes-MIR171d, mes-MIR171e, mes-MIR171f, mes-MIR171g, mes-MIR171h, mes-MIR171i, mes-MIR171j, mes-MIR171k, mes-MIR319f, mes-MIR390, mes-MIR393a, mes-MIR393b, mes-MIR393c, mes-MIR393d, mes-MIR395a, mes-MIR395b, mes-MIR395c, mes-MIR395d, mes-MIR395e, mes-MIR477h, mes-MIR477i, mes-MIR477a, mes-MIR477b, mes-MIR477c, mes-MIR477d, mes-MIR477e, mes-MIR477f, mes-MIR477g, mes-MIR482, mes-MIR530b, mes-MIR535a, mes-MIR535b, mes-MIR828a, mes-MIR828b, mes-MIR171l, mes-MIR390b, mes-MIR397b, mes-MIR398, mes-MIR399h, mes-MIR477j, mes-MIR477k, mes-MIR2118, mes-MIR482b, mes-MIR482d, mes-MIR535c, mes-MIR535d, mes-MIR1446b, mes-MIR6445, mes-MIR9386, mes-MIR169ad, mes-MIR11891
Correspondingly, mes-miR11892 with very low total sequence abundance reads also showed very low expression levels (Fig.   5). [score:3]
To corroborate qRT-PCR detection and validate the expression levels, we carried out Northern blot analysis using locked nucleic acid (LNA) probes four known miRNAs (mes-miR171a, mes-miR477k, mes-miR2118, mes-miR535c) and two novel miRNAs (mes-miR169ad and mes-miR11892). [score:3]
mes-miR169ad and mes-miR11891 had branched terminal loops while mes-miR11892 had an unbranched loop. [score:1]
Although deep sequencing has enabled the identification of very low abundance miRNAs in plants such as larch [71], Populus euphratica [72], rice [73], maize [74], soybean [75] and Brassica campestris [76], mes-miR11891 and mes-miR11892 identified here have previously not been reported. [score:1]
are variants of miR482/2118 superfamily Abundance levels were observed to vary considerably across tissues, except for mes-miR11892, and to a lesser extent, mes-miR169ad, which more or less occurred at similar levels in most of the tissues analyzed. [score:1]
are variants of miR482/2118 superfamily Abundance levels were observed to vary considerably across tissues, except for mes-miR11892, and to a lesser extent, mes-miR169ad, which more or less occurred at similar levels in most of the tissues analyzed. [score:1]
Curiously, no signals were observed for mes-miR169ad and mes-miR11892 (data not shown). [score:1]
This allowed us to identify miRNAs not previously reported in cassava, including two miRNAs, mes-miR11891 and mes-miR11892 that have not been reported in any plant species. [score:1]
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