AC MI0000092
ID hsa-mir-91
PI hsa-mir-91-13
FW MI0000071
CC miR-91 is expressed from the 5' arm of the mir-17 precursor hairpin.
//
AC MI0000096
ID hsa-mir-93-2
PI hsa-mir-93-7.2
FW MI0000095
CC Mourelatos et al. identified two copies of mir-93, but subsequent genome
CC assemblies suggest they map to a single locus.
//
AC MI0000099
ID hsa-mir-97-6
FW MI0000088
CC miR-97 appears to be expressed from the same precursor sequence of the
CC mir-30a precursor hairpin. The sequence is renamed miR-30a-5p.
//
AC MI0000104
ID hsa-mir-101-9
FW MI0000739
CC Duplicate entry removed.
//
AC MI0000106
ID hsa-mir-29b-3
PI hsa-mir-102-7.2 hsa-mir-102-3
FW MI0000105
CC Mourelatos et al. identified two copies of mir-102, which map to a single
CC locus in subsequent genome assemblies. mir-102 was later renamed to
CC mir-29b.
//
AC MI0000110
ID hsa-mir-104
PI hsa-mir-104-17
FW MI0000077
CC The mir-104 precursor sequence reported by Mourelatos et al. is the exact
CC reverse complement of mir-21 from Lagos-Quintana et al.
//
AC MI0000149
ID mmu-mir-123
FW MI0000153
CC Mouse miR-123 originates from the same precursor as miR-126.
//
AC MI0000219
ID ath-MIR180a
FW MI0000215
CC MIR180a is renamed MIR172a.
//
AC MI0000220
ID ath-MIR180b
FW MI0000216
CC MIR180b is renamed MIR172b.
//
AC MI0000258
ID mmu-mir-1b
FW MI0000139
CC The 3' end of miR-1b conflicts with the precursor sequences and genome
CC assemblies. miR-1b, 1c and 1d are merged into mir-1-1 and mir-1-2.
//
AC MI0000260
ID hsa-mir-124b
FW MI0000716
CC miR-124b is not found in either mouse or human genome assemblies so is
CC removed.
//
AC MI0000278
ID hsa-mir-196-1
FW MI0000238
CC Remove duplicate entry.
//
AC MI0000280
ID hsa-mir-199a-1
FW MI0000242
CC Remove duplicate entry.
//
AC MI0000332
ID cel-mir-227
FW MI0000051
CC miR-227 appears to be expressed from the 5' arm of the mir-80 precursor
CC hairpin.
//
AC MI0000372
ID dme-mir-263a
FW MI0000343
CC Remove duplicate entry.
//
AC MI0000396
ID mmu-mir-297-2
FW MI0000395
CC Remove low complexity duplicate entry.
//
AC MI0000435
ID hsa-mir-1b-1
FW MI0000651
CC The 3' end of miR-1b conflicts with the precursor sequences and genome
CC assemblies. miR-1b, 1c and 1d are merged into mir-1-1 and mir-1-2.
//
AC MI0000436
ID hsa-mir-1b-2
FW MI0000651
CC The 3' end of miR-1b conflicts with the precursor sequences and genome
CC assemblies. miR-1b, 1c and 1d are merged into mir-1-1 and mir-1-2.
//
AC MI0000485
ID hsa-mir-189
FW MI0000080
CC miR-189 appears to be expressed from the same precursor hairpin as
CC miR-24. Entries are merged.
//
AC MI0000506
ID cbr-mir-53
FW MI0001399
CC Low confidence in predicted C. briggsae homologue of miR-53. Later
CC reinstated as MI0001399.
//
AC MI0000516
ID cbr-mir-77
FW MI0000515
CC Remove duplicate entry.
//
AC MI0000529
ID cbr-mir-232
FW MI0000528
CC Remove duplicate entry.
//
AC MI0000574
ID mmu-mir-26a-2
FW MI0000706
CC Remove duplicate sequence. Subsequent genome assemblies suggest two
CC precursors so reinstated as MI0000706.
//
AC MI0000543
ID hsa-mir-321
FW MI0000543
CC miR-321 is a fragment of a Arg-tRNA.
//
AC MI0000705
ID mmu-mir-321
FW MI0000705
CC miR-321 is a fragment of a Arg-tRNA.
//
AC MI0000973
ID rno-mir-321
FW MI0000973
CC miR-321 is a fragment of a Arg-tRNA.
//
AC MI0000686
ID mmu-mir-10a-2
FW MI0000685
CC Two mir-10a loci in previous mouse assemblies appear to have
CC been collapsed in NCBIM33.
//
AC MI0001432
ID hsa-mir-108
FW MI0000769
CC mir-108 is the reverse complement of mir-365
//
AC MI0001658
ID kshv-mir-K12-1a
FW MI0002472
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001659
ID kshv-mir-K12-1b
FW MI0002473
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001660
ID kshv-mir-K12-2
FW MI0002477
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001661
ID kshv-mir-K12-3
FW MI0002478
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001662
ID kshv-mir-K12-4
FW MI0002479
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001663
ID kshv-mir-K12-5
FW MI0002474
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001664
ID kshv-mir-K12-6
FW MI0002480
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001665
ID kshv-mir-K12-7
FW MI0002481
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001666
ID kshv-mir-K12-8
FW MI0002482
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001667
ID kshv-mir-K12-9
FW MI0002483
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0001668
ID kshv-mir-K12-10
FW MI0002475
CC The names of the KSHV entries in release 6.0 were incompatable
CC with those published in Cai et al and Pfeffer et al.
//
AC MI0000039
ID cel-mir-68
FW MI0000039
CC mir-68 has been reclassified as an siRNA (Lim et al. Genes Dev
CC 2003 17:991-1008)
//
AC MI0000040
ID cel-mir-69
FW MI0000040
CC mir-69 has been reclassified as an siRNA (Lim et al. Genes Dev
CC 2003 17:991-1008)
//
AC MI0001864
ID dre-let-7b-1
FW MI0001865
CC Only one copy of let-7b is found in the Zv5 genome assembly --
CC duplicate removed.
//
AC MI0003250
ID fru-mir-204b
FW MI0003465
CC Only one copy of mir-204 is found in the FUGU4 genome assembly --
CC mir-204b removed.
//
AC MI0001039
ID osa-MIR395o
FW MI0001038
CC 3 identical MIR395 hairpins map to just one locus in the TIGR
CC 4.0 genome assembly, so entries merged
//
AC MI0001040
ID osa-MIR395r
FW MI0001038
CC 3 identical MIR395 hairpins map to just one locus in the TIGR
CC 4.0 genome assembly, so entries merged
//
AC MI0001153
ID osa-MIR395s
FW MI0001044
CC 3 identical miR395 hairpin precursors map to only one locus in
CC TIGR 4.0 genome assembly, so entries merged
//
AC MI0001045
ID osa-MIR395p
FW MI0001044
CC 3 identical miR395 hairpin precursors map to only one locus in
CC TIGR 4.0 genome assembly, so entries merged
//
AC MI0001949
ID dre-mir-30e-1
FW MI0001950
CC Genome assembly Zv6 contains only one mir-30e locus -- second
CC removed
//
AC MI0002129
ID dre-mir-430a-20
FW MI0002114
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002130
ID dre-mir-430a-21
FW MI0002114
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002137
ID dre-mir-430a-28
FW MI0002114
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002167
ID dre-mir-430b-27
FW MI0002146
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002168
ID dre-mir-430b-28
FW MI0002146
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002169
ID dre-mir-430b-29
FW MI0002146
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002084
ID dre-mir-430c-7
FW MI0002079
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002085
ID dre-mir-430c-8
FW MI0002079
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0002086
ID dre-mir-430c-9
FW MI0002079
CC Locus not present in Zv6 genome assembly -- removed from
CC database
//
AC MI0001942
ID dre-mir-30b-2
FW MI0001941
CC Three identical zebrafish mir-30a precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0001943
ID dre-mir-30b-3
FW MI0001941
CC Three identical zebrafish mir-30a precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0001869
ID dre-let-7d-2
FW MI0001868
CC Two identical zebrafish let-7d precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002058
ID dre-mir-223-2
FW MI0001389
CC Two identical zebrafish mir-223 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001999
ID dre-mir-135-4
FW MI0001998
CC Two identical zebrafish mir-135 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001945
ID dre-mir-30c-2
FW MI0001944
CC Two identical zebrafish mir-30c precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002020
ID dre-mir-153b-2
FW MI0002019
CC Two identical zebrafish mir-153b precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002182
ID dre-mir-460-2
FW MI0002181
CC Two identical zebrafish mir-460 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002075
ID dre-mir-454a-2
FW MI0002074
CC Two identical zebrafish mir-454a precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001914
ID dre-mir-23a-2
FW MI0001913
CC Two identical zebrafish mir-23a precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002018
ID dre-mir-152-2
FW MI0002017
CC Two identical zebrafish mir-152 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001947
ID dre-mir-30d-2
FW MI0001946
CC Three identical zebrafish mir-30d precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0001948
ID dre-mir-30d-3
FW MI0001946
CC Three identical zebrafish mir-30d precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0001859
ID dre-let-7a-3
FW MI0001858
CC Two identical zebrafish let-7a precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001924
ID dre-mir-26a-2
FW MI0001923
CC Two identical zebrafish mir-26a precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0002011
ID dre-mir-145-2
FW MI0002010
CC Two identical zebrafish mir-145 precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0002025
ID dre-mir-181c-2
FW MI0002024
CC Two identical zebrafish mir-181c precursor sequences map to
CC just one locus in genome assembly Zv6
//
AC MI0001990
ID dre-mir-132-2
FW MI0001989
CC Two identical zebrafish mir-132 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001939
ID dre-mir-29a-2
FW MI0001938
CC Two identical zebrafish mir-29a precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002044
ID dre-mir-205-2
FW MI0001378
CC Two identical zebrafish mir-205 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001935
ID dre-mir-29b-3
FW MI0001934
CC Two identical zebrafish mir-29b precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001937
ID dre-mir-29b-5
FW MI0001936
CC Two identical zebrafish mir-29b precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002055
ID dre-mir-219-4
FW MI0001385
CC Four identical zebrafish mir-219 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002056
ID dre-mir-219-5
FW MI0001385
CC Four identical zebrafish mir-219 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002057
ID dre-mir-219-6
FW MI0001385
CC Four identical zebrafish mir-219 precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0001974
ID dre-mir-125a-3
FW MI0001973
CC Two identical zebrafish mir-125a precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002127
ID dre-mir-430a-18
FW MI0002121
CC 8 identical zebrafish mir-430a precursor sequences map to 6 loci
CC in genome assembly Zv6
//
AC MI0002128
ID dre-mir-430a-19
FW MI0002121
CC 8 identical zebrafish mir-430a precursor sequences map to 6 loci
CC in genome assembly Zv6
//
AC MI0002136
ID dre-mir-430a-25
FW MI0001527
CC Two identical zebrafish mir-430a precursor sequences map to just
CC one locus in genome assembly Zv6
//
AC MI0002159
ID dre-mir-430b-19
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002160
ID dre-mir-430b-20
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002161
ID dre-mir-430b-21
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002162
ID dre-mir-430b-22
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002163
ID dre-mir-430b-23
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002164
ID dre-mir-430b-24
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002165
ID dre-mir-430b-25
FW MI0002152
CC 16 identical zebrafish mir-430b precursor sequences map to 9
CC loci in genome assembly Zv6
//
AC MI0002145
ID dre-mir-430b-5
FW MI0001528
CC 5 identical zebrafish mir-430b precursor sequences map to 4 loci
CC in genome assembly Zv6
//
AC MI0002102
ID dre-mir-430c-22
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002103
ID dre-mir-430c-23
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002104
ID dre-mir-430c-24
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002105
ID dre-mir-430c-25
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002106
ID dre-mir-430c-26
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002107
ID dre-mir-430c-27
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002108
ID dre-mir-430c-28
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002109
ID dre-mir-430c-29
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0002110
ID dre-mir-430c-30
FW MI0002079
CC 28 identical zebrafish mir-430b precursor sequences map to only
CC 19 loci in genome assembly Zv6
//
AC MI0001964
ID dre-mir-107-2
FW MI0001963
CC Two identical zebrafish mir-107 precursor sequences map to only
CC one loci in genome assembly Zv6
//
AC MI0002078
ID dre-mir-455-2
FW MI0002077
CC Two identical zebrafish mir-455 precursor sequences map to only
CC one locus in genome assembly Zv6
//
AC MI0001797
ID zma-MIR395c
FW MI0001799
CC mispredicted hairpin overlapped with MIR395a
//
AC MI0003606
ID hsa-mir-594
FW MI0003606
CC miR-594 is a fragment of an annotated tRNA gene.
//
AC MI0001285
ID gga-mir-222b
FW MI0001177
CC Latest chicken genome assembly suggests that mir-222a and b are
CC identical
//
AC MI0005001
ID gga-mir-757-3
FW MI0004999
CC 3 predicted mir-757 loci collapse to 2 in latest chicken genome
CC assembly
//
AC MI0001286
ID gga-mir-7b-2
FW MI0001279
CC 2 mir-7b loci collapse to 1 in the latest chicken genome
CC assembly
//
AC MI0004709
ID ppt-MIR1210
FW MI0005672
CC MIR1210 is expressed from the MIR477a hairpin precursor
//
AC MI0004712
ID ppt-MIR1213
FW MI0005674
CC MIR1213 is expressed from the MIR477g hairpin precursor
//
AC MI0003571
ID hsa-mir-565
FW MI0003571
CC This sequence is likely a tRNA fragment, not a miRNA (Berezikov
CC et al, Nat Gen 2006 38:S2-7).
//
AC MI0003566
ID hsa-mir-560
FW MI0003566
CC mir-560 is likely a fragment of an rRNA transcript, not a miRNA
CC (Landgraf et al, Cell. 2007 129(7):1401-14.)
//
AC MI0005522
ID hsa-mir-672
FW MI0004258
CC mir-672 was cloned from human, but is absent in the NCBI36
CC genome assembly. The previously displayed human hairpin was the
CC mouse sequence.
//
AC MI0005535
ID hsa-mir-674
FW MI0004611
CC mir-674 was cloned from human, but is absent in the NCBI36
CC genome assembly. The previously displayed human hairpin was the
CC mouse sequence.
//
AC MI0005526
ID hsa-mir-871
FW MI0005471
CC mir-871 was cloned from human, but is absent in the NCBI36
CC genome assembly. The previously displayed human hairpin was the
CC mouse sequence.
//
AC MI0005558
ID hsa-mir-872
FW MI0005549
CC mir-872 was cloned from human, but is absent in the NCBI36
CC genome assembly. The previously displayed human hairpin was the
CC mouse sequence.
//
AC MI0005202
ID hsa-mir-801
FW MI0005202
CC miR-801 appears to be a fragment of U11 spliceosomal RNA, so is
CC removed
//
AC MI0005376
ID mmu-mir-801
FW MI0005376
CC miR-801 appears to be a fragment of U11 spliceosomal RNA, so is
CC removed
//
AC MI0006105
ID hsv1-mir-LAT
FW MI0006105
CC The discovery of herpes miR-LAT was retracted by the authors in
CC Nature 2008 451(7178):600.
//
AC MI0005117
ID hsa-mir-768
FW MI0005117
CC mir-768 overlaps an annotated snoRNA, HBII-239. Phylogenetic
CC analysis in all vertebrates supports the snoRNA annotation, with
CC poor conservation of the reported mature miRNA sequence (Weber
CC M, pers comm). It is therefore removed from the database.
//
AC MI0007912
ID mml-mir-768
FW MI0007912
CC mir-768 overlaps an annotated snoRNA, HBII-239. Phylogenetic
CC analysis in all vertebrates supports the snoRNA annotation, with
CC poor conservation of the reported mature miRNA sequence (Weber
CC M, pers comm). It is therefore removed from the database.
//
AC MI0000610
ID rno-mir-333
FW MI0000610
CC The described mir-333 precursor overlaps a strongly predicted tRNA
CC (tRNAscan-SE) and has over 15000 highly similar matches in the rat
CC genome. The mature sequence is therefore likely a mis-annotated
CC fragment of a tRNA-derived SINE.
//
AC MI0006456
ID bna-MIR171g
FW MI0005771
CC Duplicate entry removed
//
AC MI0008936
ID tca-mir-9a
FW MI0008935
CC Merged with duplicate entry
//
AC MI0005752
ID ame-mir-930
FW MI0005752
CC Apis miR-930 appears to be a misannotated fragment of the
CC distal-less gene (Peterson K, pers. comm.), so is removed from
CC the database.
//
AC MI0010002
ID bmo-mir-930
FW MI0010002
CC Bombyx miR-930 appears to be a misannotated fragment of a
CC homeobox gene (Peterson K, pers. comm.), so is removed from the
CC database.
//
AC MI0009999
ID bmo-mir-925
FW MI0005746
CC miR-925 appears to be a misannotated fragment HRNBP1 coding
CC seqeunce (Peterson K, pers. comm.), so is removed from the
CC database.
//
AC MI0005746
ID ame-mir-925
FW MI0005746
CC miR-925 appears to be a misannotated fragment HRNBP1 coding
CC seqeunce (Peterson K, pers. comm.), so is removed from the
CC database.
//
AC MI0005753
ID ame-mir-931
FW MI0005753
CC Apis miR-931 appears to be a misannotated fragment of nefrin
CC coding seqeunce (Peterson K, pers. comm.), so is removed from
CC the database.
//
AC MI0005747
ID ame-mir-926
FW MI0005747
CC Apis miR-931 appears to be a misannotated fragment of glutamate
CC receptor 1B gene (Peterson K, pers. comm.), so is removed from
CC the database.
//
AC MI0008392
ID bmo-mir-1922
FW MI0008392
CC Bombyx miR-1922 appears to be a misannotated fragment of 28S
CC rRNA (Peterson K, pers. comm.), so is removed from the database.
//
AC MI0008396
ID bmo-mir-1925
FW MI0008396
CC Bombyx miR-1925 appears to be a misannotated fragment of 5S rRNA
CC (Peterson K, pers. comm.), so is removed from the database.
//
AC MI0008395
ID bmo-mir-1924
FW MI0008395
CC Bombyx miR-1924 appears to be a misannotated fragment of the
CC spectrin mRNA (Peterson K, pers. comm.), so is removed from the
CC database.
//
AC MI0004785
ID dre-mir-739
FW MI0004785
CC mir-739 appears to be a fragment of rRNA, and so is removed from
CC the database
//
AC MI0005715
ID hsa-mir-923
FW MI0005715
CC Human mir-923 appears to be a frgament of the 28S rRNA, so is
CC removed from the database
//
AC MI0008878
ID ptr-mir-923
FW MI0008878
CC Human mir-923 appears to be a frgament of the 28S rRNA, so is
CC removed from the database
//
AC MI0008207
ID gga-mir-739
FW MI0008207
CC mir-739 a appears to be a fragment of 28S rRNA, so is removed
//
AC MI0004683
ID mmu-mir-699
FW MI0004683
CC mmu-mir-699 appears to be a fragment of RNase MRP RNA (Paul
CC Gardner, pers comm), so is removed from miRBase
//
AC MI0006483
ID bna-MIR1140b
FW MI0006482
CC Remove duplicate entry
//
AC MI0003833
ID hsa-mir-675b
FW MI0005416
CC Remove duplicate entry
//
AC MI0010472
ID bta-mir-1300a
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0010482
ID bta-mir-1300b
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008504
ID ptr-mir-1300b
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008505
ID ptr-mir-1300a-3
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008506
ID ptr-mir-1300a-4
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008507
ID ptr-mir-1300a-1
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008508
ID ptr-mir-1300a-5
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008509
ID ptr-mir-1300a-6
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008510
ID ptr-mir-1300a-7
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008511
ID ptr-mir-1300a-8
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008512
ID ptr-mir-1300a-9
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008513
ID ptr-mir-1300a-10
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008514
ID ptr-mir-1300a-11
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0008515
ID ptr-mir-1300a-2
FW MI0006360
CC mir-1300 appears to be a fragment of the EEF1A mRNA. The
CC putative miRNA has been experimentally detected only in human.
CC Annotation by homology finds many EEF hits and is therefore
CC inappropriate.
//
AC MI0006360
ID hsa-mir-1300
FW MI0006360
CC The sequenced mature miR-1300 appears to be a fragment of the
CC EEF1A mRNA, so is removed from the database.
//
AC MI0001559
ID sbi-MIR169e
FW MI0001559
CC This sequence is absent from the JGI sbi1 genome assembly, so is
CC removed from the database
//
AC MI0001571
ID sbi-MIR172d
FW MI0001571
CC This sequence is absent from the JGI sbi1 genome assembly, so is
CC removed from the database
//
AC MI0001562
ID sbi-MIR169h
FW MI0001561
CC MIR169g and MIR169h map to a single location in the JGI sbi1
CC genome assembly. The latter is removed here.
//
AC MI0001532
ID sbi-MIR394b
FW MI0001531
CC MIR394a and MIR394b map to a single location in the JGI sbi1
CC genome assembly. The latter is removed here.
//
AC MI0001535
ID sbi-MIR395c
FW MI0001536
CC MIR395c overlaps MIR395d and MIR395e, so is removed.
//
AC MI0010513
ID bfl-mir-2074
FW MI0010513
CC mir-2074 is a fragment of LSU rRNA and so is removed from the
CC database (Peterson K, pers comm).
//
AC MI0007060
ID gga-mir-1455
FW MI0007060
CC mir-1455 appears to be a fragment of a tRNA, so is removed from
CC the database
//
AC MI0012955
ID eca-mir-322
FW MI0012963
CC mir-322 and mir-424 from Zhou et al map to the same locus, so
CC mir-322 is removed from the database.
//
AC MI0010756
ID mmu-mir-2143-1
FW MI0010756
CC miR-2143 is a fragment of 28S rRNA so is removed from the
CC database.
//
AC MI0010757
ID mmu-mir-2143-2
FW MI0010757
CC miR-2143 is a fragment of 28S rRNA so is removed from the
CC database.
//
AC MI0010758
ID mmu-mir-2143-3
FW MI0010758
CC miR-2143 is a fragment of 28S rRNA so is removed from the
CC database.
//
AC MI0010759
ID mmu-mir-2144
FW MI0010759
CC miR-2144 is a fragment of 28S rRNA so is removed from the
CC database.
//
AC MI0005422
ID cbr-mir-789a
FW MI0005422
CC cbr-mir-789a appears to be a fragment of a tRNA, so is removed.
//
AC MI0008201
ID cel-mir-1831
FW MI0008201
CC mir-1831 appears to be a fragment of a U1 snRNA, so is removed.
//
AC MI0005485
ID mmu-mir-197
FW MI0005485
CC Only two clones support the presence of mir-197 in mouse
CC (Landgraf et al), but the sequence does not map in a stem-loop
CC region of the genomic sequence or any any known mouse transcript
CC sequence. It is therefore removed from miRBase.
//
AC MI0004649
ID mmu-mir-685
FW MI0004649
CC mir-685 is found to be a fragment of RNase P RNA, so is removed
CC from the database.
//
AC MI0009888
ID bta-mir-685
FW MI0009888
CC mir-685 is found to be a fragment of RNase P RNA, so is removed
CC from the database.
//
AC MI0012620
ID rno-mir-685
FW MI0012620
CC mir-685 is found to be a fragment of RNase P RNA, so is removed
CC from the database.
//
AC MI0012660
ID eca-mir-685
FW MI0012660
CC mir-685 is found to be a fragment of RNase P RNA, so is removed
CC from the database.
//
AC MI0007555
ID gga-mir-1810
FW MI0007555
CC mir-1810 is a fragment of 28S rRNA, so is removed from the
CC database.
//
AC MI0005204
ID mmu-mir-805
FW MI0005204
CC mir-805 maps to the Mt genome, and overlaps a Mt tRNA sequence
CC so is removed.
//
AC MI0009984
ID hsa-mir-1974
FW MI0009984
CC mir-1974 maps to the Mt genome, and overlaps a Mt tRNA sequence
CC so is removed.
//
AC MI0009987
ID hsa-mir-1977
FW MI0009987
CC mir-1977 maps to the Mt genome, and overlaps a Mt tRNA sequence
CC so is removed.
//
AC MI0009988
ID hsa-mir-1978
FW MI0009988
CC mir-1978 maps to the Mt genome, and overlaps a Mt tRNA sequence
CC so is removed.
//
AC MI0008390
ID bmo-mir-1920
FW MI0008390
CC The pattern of reads from high throughput sequencing experiments
CC (Jagadeeswaran et al. BMC Genomics, 2010) overlapping this locus
CC is not consistent with microRNA processing from a hairpin
CC precursor. This sequence is therefore removed from the database.
//
AC MI0008391
ID bmo-mir-1921
FW MI0008391
CC The pattern of reads from high throughput sequencing experiments
CC (Jagadeeswaran et al. BMC Genomics, 2010) overlapping this locus
CC is not consistent with microRNA processing from a hairpin
CC precursor. This sequence is therefore removed from the database.
//
AC MI0012189
ID bmo-mir-2740
FW MI0012189
CC This candidate Bombyx sequence does not adopt a miRNA-like
CC hairpin, so is removed from the database.
//
AC MI0012184
ID bmo-mir-2735
FW MI0012184
CC This candidate Bombyx sequence is a fragment of a predicted
CC protein-coding exon, so is removed.
//
AC MI0012194
ID bmo-mir-2743
FW MI0012194
CC This candidate Bombyx sequence is a fragment of a predicted
CC protein-coding exon, so is removed.
//
AC MI0012197
ID bmo-mir-2746
FW MI0012197
CC This candidate Bombyx sequence is a fragment of U1 RNA.
//
AC MI0012172
ID bmo-mir-2725
FW MI0012172
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012173
ID bmo-mir-2726
FW MI0012173
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012174
ID bmo-mir-2727
FW MI0012174
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012176
ID bmo-mir-2728
FW MI0012176
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012181
ID bmo-mir-2732
FW MI0012181
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012191
ID bmo-mir-2741
FW MI0012191
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012198
ID bmo-mir-2747
FW MI0012198
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012200
ID bmo-mir-2749
FW MI0012200
CC This length of this candidate Bombyx mature sequences is outside
CC the expected range. The entry is deleted.
//
AC MI0012202
ID bmo-mir-2750
FW MI0012202
CC This candidate Bombyx sequence maps many times to the genome,
CC and is lacking miR* evidence, so is deemed to be low confidence
CC and is removed.
//
AC MI0012178
ID bmo-mir-2730
FW MI0012178
CC This candidate Bombyx sequence maps many times to the genome,
CC and is lacking miR* evidence, so is deemed to be low confidence
CC and is removed.
//
AC MI0010755
ID mmu-mir-2142
FW MI0010755
CC mir-2142 is a fragment of 5S rRNA (Cei Abreu-Goodger, pers.
CC comm.), so is removed from the database.
//
AC MI0012251
ID dpu-mir-87
FW MI0012251
CC The Daphnia mir-87 hairpin reported in Wheeler et al. is
CC Drosophila melanogaster sequence. The Daphnia entry is removed.
//
AC MI0012641
ID bta-mir-9-3
FW MI0009912
CC bta-mir-9-3 maps to the same location in the genome assembly as
CC mir-9-1, so is removed.
//
AC MI0012654
ID eca-mir-204a
FW MI0012657
CC eca-mir-204a is a duplicate of mir-211 and is removed.
//
AC MI0001253
ID gga-mir-124b-2
FW MI0001252
CC mir-124b maps to just one location in the WashU 2.0 assembly, so
CC the entries are merged.
//
AC MI0006985
ID gga-mir-33-2
FW MI0001170
CC mir-33 maps to just one location in the WashU 2.0 genome
CC assembly, so entries -1 and -2 are merged.
//
AC MI0001284
ID gga-mir-218-3
FW MI0001212
CC mir-218-3 maps to the same locus as mir-218-1, so is removed
//
AC MI0006500
ID vvi-MIR160e
FW MI0006497
CC vvi-MIR160e maps to the same genomic location as MIR160b, so is
CC removed.
//
AC MI0007957
ID vvi-MIR397b
FW MI0007956
CC vvi-MIR397b maps to the same genomic location as MIR397a, so is
CC removed.
//
AC MI0006582
ID vvi-MIR535c
FW MI0006581
CC This sequence maps to the same genomic location as MIR535b, so
CC is removed.
//
AC MI0006584
ID vvi-MIR535e
FW MI0006583
CC This sequence maps to the same genomic location as MIR535d, so
CC is removed.
//
AC MI0001890
ID dre-mir-10d-2
FW MI0001889
CC dre-mir-10d-1 and mir-10d-2 map to the same locus, so are
CC merged.
//
AC MI0001727
ID hsa-mir-453
FW MI0014206
CC miR-453 is processed from the 5p arm of mir-323b. The entries
CC are merged.
//
AC MI0010021
ID bfl-mir-79
FW MI0010520
CC bfl-miR-79 is processed from the 3p arm of the mir-9 hairpins.
CC Entries merged.
//
AC MI0014149
ID hsa-mir-3130-3
FW MI0014147
CC mir-3130-3 is redundant with mir-3130-1, so is removed.
//
AC MI0014150
ID hsa-mir-3130-4
FW MI0014148
CC mir-3130-4 is redundant with mir-3130-2, so is removed.
//
AC MI0000297
ID hsa-mir-220a
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0002887
ID mml-mir-220a
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0002888
ID ptr-mir-220a
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0005529
ID hsa-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0005536
ID hsa-mir-220c
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0007677
ID mml-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0007678
ID mml-mir-220c
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0007679
ID mml-mir-220d
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0008381
ID xla-mir-220c
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0008586
ID ptr-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010380
ID cfa-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010381
ID cfa-mir-220a
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010442
ID bta-mir-220d
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010448
ID bta-mir-220e
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010449
ID bta-mir-220c-2
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010450
ID bta-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010451
ID bta-mir-220c-1
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0010461
ID bta-mir-220a
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0012588
ID rno-mir-220-1
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0012847
ID eca-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0012848
ID eca-mir-220b-2
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0014870
ID ppy-mir-220a
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0014871
ID ppy-mir-220b
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0014872
ID ppy-mir-220c
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0015967
ID rno-mir-220-2
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0001386
ID dre-mir-220
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0002889
ID ggo-mir-220
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0002890
ID mne-mir-220
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0002891
ID ppa-mir-220
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0005487
ID mmu-mir-220
FW MI0001386
CC mir-220 was predicted computationally by the Bartel group, and
CC expression demonstrated in zebrafish (Lim et al, PMID:12624257).
CC Expression of mir-220 has never been demonstrated in any other
CC animal, but annotation was transferred to other vertebrates by
CC similarity. Subsequent work strongly suggests that mir-220 is
CC not a miRNA (Chiang et al, PMID:20413612), and it is therefore
CC withdrawn by the authors and all mir-220 sequences are deleted
CC from miRBase.
//
AC MI0006441
ID hsa-mir-1308
FW MI0006441
CC The mature miR-1308 is a fragment of a tRNA, and is therefore
CC removed.
//
AC MI0013116
ID ssc-mir-1308
FW MI0013116
CC The mature miR-1308 is a fragment of a tRNA, and is therefore
CC removed.
//
AC MI0012639
ID peu-MIR2915
FW MI0012639
CC The mature miR2915 is a fragment of a tRNA, and is therefore
CC removed.
//
AC MI0015942
ID bta-mir-3114
FW MI0015942
CC The mature miR-3114 is a fragment of a tRNA, and is therefore
CC removed.
//
AC MI0007783
ID mml-mir-512-2
FW MI0007782
CC Previously annotated mir-512-1 and mir-512-2 map to same
CC location in the MMUL1.0 genome assembly.
//
AC MI0001911
ID dre-mir-22a-2
FW MI0001910
CC Previously annotated mir-22a-1 and mir-22a-2 map to same
CC location in the Zv8 genome assembly.
//
AC MI0002043
ID dre-mir-204-3
FW MI0002042
CC Previously annotated mir-204-2 and mir-204-3 map to same
CC location in the Zv8 genome assembly.
//
AC MI0007781
ID mml-mir-511-2
FW MI0007780
CC Previously annotated mir-511-1 and mir-511-2 map to same
CC location in the MMUL1.0 genome assembly.
//
AC MI0007784
ID mml-mir-514-2
FW MI0006621
CC Previously annotated mir-514-1 and mir-514-2 map to same
CC location in the MMUL1.0 genome assembly.
//
AC MI0007788
ID mml-mir-517b
FW MI0007787
CC Previously annotated mir-517a and mir-517b map to same location
CC in the MMUL1.0 genome assembly.
//
AC MI0007811
ID mml-mir-523c-1
FW MI0007796
CC Two annotated mir-523c sequences map to the location as mir-519b
CC in the MMUL1.0 genome assembly. The mir-523c loci are removed.
//
AC MI0007812
ID mml-mir-523c-2
FW MI0007796
CC Two annotated mir-523c sequences map to the location as mir-519b
CC in the MMUL1.0 genome assembly. The mir-523c loci are removed.
//
AC MI0007800
ID mml-mir-520b
FW MI0007795
CC Three annotated mir-520 sequences map to the location as
CC mir-519a in the MMUL1.0 genome assembly. The mir-520 loci are
CC removed.
//
AC MI0007801
ID mml-mir-520c
FW MI0007795
CC Three annotated mir-520 sequences map to the location as
CC mir-519a in the MMUL1.0 genome assembly. The mir-520 loci are
CC removed.
//
AC MI0007803
ID mml-mir-520e
FW MI0007795
CC Three annotated mir-520 sequences map to the location as
CC mir-519a in the MMUL1.0 genome assembly. The mir-520 loci are
CC removed.
//
AC MI0007804
ID mml-mir-520f
FW MI0007795
CC Three annotated mir-520 sequences map to the location as
CC mir-519a in the MMUL1.0 genome assembly. The mir-520 loci are
CC removed.
//
AC MI0007806
ID mml-mir-520h
FW MI0007798
CC mir-520h maps to the same location as mir-519d in the MMUL1.0
CC genome assembly.
//
AC MI0007808
ID mml-mir-522
FW MI0007793
CC mir-522 maps to the same location as mir-518e in the MMUL1.0
CC genome assembly.
//
AC MI0007802
ID mml-mir-520d
FW MI0007789
CC mir-520d maps to the same location as mir-518a in the MMUL1.0
CC genome assembly.
//
AC MI0007792
ID mml-mir-518d
FW MI0007791
CC mir-518d maps to the same location as mir-518c in the MMUL1.0
CC genome assembly.
//
AC MI0010738
ID mmu-mir-2133-1
FW MI0010738
CC The mature sequence annotated as miR-2133 is a fragment of SSU
CC rRNA.
//
AC MI0010739
ID mmu-mir-2133-2
FW MI0010739
CC The mature sequence annotated as miR-2133 is a fragment of SSU
CC rRNA.
//
AC MI0012638
ID peu-MIR2914
FW MI0012638
CC The mature sequence annotated as miR2914 is a fragment of SSU
CC rRNA.
//
AC MI0013057
ID bta-mir-2884
FW MI0013057
CC The mature sequence annotated as miR-2884 is a fragment of SSU
CC rRNA.
//
AC MI0012633
ID peu-MIR2910
FW MI0012633
CC The mature sequence annotated as miR2910 is a fragment of LSU
CC rRNA.
//
AC MI0008194
ID hsa-mir-1826
FW MI0008194
CC The annotated mature sequence is a fragment of 5.8S rRNA.
//
AC MI0005527
ID hsa-mir-886
FW MI0005527
CC The annotated mature sequence is a fragment of Vault RNA
CC (Stadler et al. PMID:19491402).
//
AC MI0007920
ID mml-mir-886
FW MI0007920
CC The annotated mature sequence is a fragment of Vault RNA
CC (Stadler et al. PMID:19491402).
//
AC MI0008868
ID ptr-mir-886
FW MI0008868
CC The annotated mature sequence is a fragment of Vault RNA
CC (Stadler et al. PMID:19491402).
//
AC MI0015156
ID ppy-mir-886
FW MI0015156
CC The annotated mature sequence is a fragment of Vault RNA
CC (Stadler et al. PMID:19491402).
//
AC MI0009985
ID hsa-mir-1975
FW MI0009985
CC The annotated mature sequence is a fragment of Y RNA (Meiri et
CC al, PMID:20483914).
//
AC MI0006333
ID hsa-mir-1201
FW MI0006333
CC The miRNA overlaps an annotated snoRNA (SNORD126, Rfam 10.0,
CC Infernal 1.0). The patterns of sequence conservation support the
CC snoRNA annotation, so this sequence is likely not a miRNA.
//
AC MI0008423
ID ptr-mir-1201
FW MI0008423
CC The miRNA overlaps an annotated snoRNA (SNORD126, Rfam 10.0,
CC Infernal 1.0). The patterns of sequence conservation support the
CC snoRNA annotation, so this sequence is likely not a miRNA.
//
AC MI0015187
ID ppy-mir-1201
FW MI0015187
CC The miRNA overlaps an annotated snoRNA (SNORD126, Rfam 10.0,
CC Infernal 1.0). The patterns of sequence conservation support the
CC snoRNA annotation, so this sequence is likely not a miRNA.
//
AC MI0006393
ID hsa-mir-1259
FW MI0006393
CC The miRNA overlaps an annotated snoRNA (SNORD12, Rfam 10.0,
CC Infernal 1.0). The patterns of sequence conservation support the
CC snoRNA annotation, so this sequence is likely not a miRNA.
//
AC MI0008463
ID ptr-mir-1259
FW MI0008463
CC The miRNA overlaps an annotated snoRNA (SNORD12, Rfam 10.0,
CC Infernal 1.0). The patterns of sequence conservation support the
CC snoRNA annotation, so this sequence is likely not a miRNA.
//
AC MI0014203
ID hsa-mir-3172
FW MI0014203
CC The mature miR-3172 is a fragment of a predicted tRNA (Rfam
CC 10.0, Infernal 1.0).
//
AC MI0009989
ID hsa-mir-1979
FW MI0009989
CC The mature miR-1979 is a fragment of a Y RNA (Meiri et al,
CC PMID:20483914).
//
AC MI0010737
ID mmu-mir-2132
FW MI0010737
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010740
ID mmu-mir-2134-1
FW MI0010740
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010741
ID mmu-mir-2134-2
FW MI0010741
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010742
ID mmu-mir-2134-3
FW MI0010742
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010743
ID mmu-mir-2134-4
FW MI0010743
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010744
ID mmu-mir-2135-1
FW MI0010744
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010745
ID mmu-mir-2135-4
FW MI0010745
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010746
ID mmu-mir-2135-5
FW MI0010746
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010747
ID mmu-mir-2135-2
FW MI0010747
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010748
ID mmu-mir-2135-3
FW MI0010748
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010751
ID mmu-mir-2138
FW MI0010751
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0013182
ID mmu-mir-2134-5
FW MI0013182
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0013183
ID mmu-mir-2134-6
FW MI0013183
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010753
ID mmu-mir-2140
FW MI0010753
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010754
ID mmu-mir-2141
FW MI0010754
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0010762
ID mmu-mir-2146
FW MI0010762
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0004654
ID mmu-mir-689-1
FW MI0004654
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0004655
ID mmu-mir-689-2
FW MI0004655
CC The annotated miRNA sequence is a fragment of rRNA (Chiang et
CC al, PMID:20413612).
//
AC MI0005680
ID ppt-MIR896
FW MI0005680
CC The annotated mature miR896 sequence is a fragment of a tRNA
CC (Rfam 10.0, Infernal 1.0, tRNAscan-SE).
//
AC MI0015716
ID cin-mir-4161
FW MI0015713
CC cin-mir-4158 and cin-mir-4161 are alternative hairpins for the
CC same mature miRNA. The latter is removed.
//
AC MI0012586
ID rno-mir-513
FW MI0015460
CC mir-3585 is a duplicate of mir-513. The entries are merged.
//
AC MI0014709
ID aae-mir-9c
FW MI0013436
CC aae-mir-9 and aae-mir-9c are duplicate entries, so are merged.
//
AC MI0002404
ID mmu-mir-469
FW MI0002404
CC The pattern of deep sequencing reads from this putative mir-469
CC locus is not consistent with miRNA processing -- many reads
CC overlap the loop region, and are tiled across the whole hairpin
CC (Chiang et al. Genes Dev. 2010).
//
AC MI0002399
ID mmu-mir-464
FW MI0002399
CC The pattern of deep sequencing reads from the putative mir-464
CC locus is not consistent with miRNA processing -- many reads
CC overlap the loop region, and are tiled across the whole hairpin
CC (Chiang et al. Genes Dev. 2010).
//
AC MI0009933
ID mmu-mir-1944
FW MI0009933
CC The pattern of deep sequencing reads from the putative mir-1944
CC locus is not consistent with miRNA processing -- many reads
CC overlap the loop region, and are tiled across the whole hairpin
CC (Chiang et al. Genes Dev. 2010).
//
AC MI0010760
ID mmu-mir-2145-1
FW MI0010760
CC The sequence annotated as mature miR-2145 is a fragment of 5S
CC rRNA (Chiang et al. Genes Dev. 2010), so is removed from the
CC database.
//
AC MI0010761
ID mmu-mir-2145-2
FW MI0010761
CC The sequence annotated as mature miR-2145 is a fragment of 5S
CC rRNA (Chiang et al. Genes Dev. 2010), so is removed from the
CC database.
//
AC MI0009928
ID mmu-mir-1939
FW MI0009928
CC The sequence annotated as mature miR-1939 is a fragment of mouse
CC Gly-tRNA, and is therefore not a likely to be a bona fide miRNA.
//
AC MI0009956
ID mmu-mir-1959
FW MI0009956
CC The sequence annotated as mature miR-1959 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson K,
CC pers. comm.).
//
AC MI0009926
ID mmu-mir-1937a
FW MI0009926
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0009938
ID mmu-mir-1937b-1
FW MI0009938
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0009953
ID mmu-mir-1937c
FW MI0009953
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0014698
ID mmu-mir-1937b-2
FW MI0014698
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0014700
ID mmu-mir-1937b-3
FW MI0014700
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0014702
ID mmu-mir-1937b-4
FW MI0014702
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0014703
ID mmu-mir-1937b-5
FW MI0014703
CC The sequence annotated as mature miR-1937 is a fragment of tRNA,
CC and is therefore not a likely to be a bona fide miRNA (Peterson
CC K, pers. comm.).
//
AC MI0004700
ID mmu-mir-715
FW MI0004700
CC The pattern of deep sequencing reads from the putative mir-715
CC locus is not consistent with miRNA processing -- many reads
CC overlap the loop region, and are tiled across the whole hairpin
CC (Chiang et al. Genes Dev. 2010). Calabrese et al. (2007) also
CC challenge this annotation, suggesting that it derives from the
CC pre-rRNA transcript.
//
AC MI0006410
ID hsa-mir-1274a
FW MI0006410
CC The putative mature miR-1274 sequence is a fragment of a Lys
CC tRNA (Schopman et al. 2010, PMID:20818168).
//
AC MI0006427
ID hsa-mir-1274b
FW MI0006427
CC The putative mature miR-1274 sequence is a fragment of a Lys
CC tRNA (Schopman et al. 2010, PMID:20818168).
//
AC MI0008475
ID ptr-mir-1274b
FW MI0008475
CC The putative mature miR-1274 sequence is a fragment of a Lys
CC tRNA (Schopman et al. 2010, PMID:20818168).
//
AC MI0009969
ID mmu-mir-1274a
FW MI0009969
CC The putative mature miR-1274 sequence is a fragment of a Lys
CC tRNA (Schopman et al. 2010, PMID:20818168).
//
AC MI0015231
ID ppy-mir-1274a
FW MI0015231
CC The putative mature miR-1274 sequence is a fragment of a Lys
CC tRNA (Schopman et al. 2010, PMID:20818168).
//
AC MI0015232
ID ppy-mir-1274b
FW MI0015232
CC The putative mature miR-1274 sequence is a fragment of a Lys
CC tRNA (Schopman et al. 2010, PMID:20818168).
//
AC MI0011563
ID bdi-MIR160
FW MI0011563
CC MIR160 does not map to the JGI 1.0 genome, so is removed.
//
AC MI0011569
ID bdi-MIR171d
FW MI0011569
CC MIR171d does not map to the JGI 1.0 genome, so is removed.
//
AC MI0011560
ID bdi-MIR408
FW MI0011560
CC MIR408 does not map to the JGI 1.0 genome, so is removed.
//
AC MI0011564
ID bdi-MIR169a
FW MI0011564
CC MIR169a does not map to the JGI 1.0 genome, so is removed.
//
AC MI0013365
ID ath-MIR2935
FW MI0013365
CC The pattern of reads from deep sequencing experiments does not
CC support a miRNA annotation (Kozomara and Griffiths-Jones, NAR
CC 2011 39:D152-D157)
//
AC MI0012527
ID mdo-mir-739
FW MI0012527
CC mir-739 appears to be a fragment of rRNA, and so is removed from
CC the database
//
AC MI0015970
ID dre-let-7e-2
FW MI0001871
CC Two annotated let-7e loci collapse to a single locus in the Zv9
CC assembly.
//
AC MI0001985
ID dre-mir-130a-2
FW MI0001984
CC Two annotated mir-130a loci collapse to a single locus in the
CC Zv9 assembly.
//
AC MI0001998
ID dre-mir-135c-3
FW MI0001997
CC Three annotated mir-135c loci collapse to two loci in the Zv9
CC assembly.
//
AC MI0002014
ID dre-mir-146b-2
FW MI0002013
CC Two annotated mir-146b loci collapse to a single locus in the
CC Zv9 assembly.
//
AC MI0002031
ID dre-mir-193a-3
FW MI0002030
CC Three annotated mir-193a loci collapse to two in the Zv9
CC assembly.
//
AC MI0002047
ID dre-mir-216a-2
FW MI0001382
CC Two annotated mir-216a loci collapse to a single locus in the
CC Zv9 assembly.
//
AC MI0002049
ID dre-mir-216b-2
FW MI0002048
CC Two annotated mir-216b loci collapse to a single locus in the
CC Zv9 assembly.
//
AC MI0002050
ID dre-mir-217-2
FW MI0001383
CC Two annotated mir-217 loci collapse to a single locus in the Zv9
CC assembly.
//
AC MI0002066
ID dre-mir-338-4
FW MI0002064
CC Four annotated mir-338 loci collapse to two in the Zv9 assembly.
//
AC MI0002065
ID dre-mir-338-3
FW MI0002063
CC Four annotated mir-338 loci collapse to two in the Zv9 assembly.
//
AC MI0002071
ID dre-mir-365-4
FW MI0002070
CC Four annotated mir-365 loci collapse to three in the Zv9
CC assembly.
//
AC MI0002060
ID dre-mir-301a-2
FW MI0002059
CC Two annotated mir-301a loci collapse to one in the Zv9 assembly.
//
AC MI0003394
ID dre-mir-29a-2
FW MI0001938
CC Two annotated mir-29a loci collapse to one in the Zv9 assembly.
//
AC MI0001936
ID dre-mir-29b-3
FW MI0001934
CC Three annotated mir-29b loci collapse to two in the Zv9
CC assembly.
//
AC MI0002175
ID dre-mir-430j
FW MI0002175
CC mir-430j is absent from the Zv9 assembly
//
AC MI0002101
ID dre-mir-430c-21
FW MI0001529
CC A number of mir-430c loci are merged in the Zv9 assembly
//
AC MI0002100
ID dre-mir-430c-20
FW MI0001529
CC A number of mir-430c loci are merged in the Zv9 assembly
//
AC MI0002099
ID dre-mir-430c-19
FW MI0001529
CC A number of mir-430c loci are merged in the Zv9 assembly
//
AC MI0002172
ID dre-mir-430b-21
FW MI0002149
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002173
ID dre-mir-430b-22
FW MI0002158
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002174
ID dre-mir-430b-23
FW MI0002170
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002138
ID dre-mir-430a-23
FW MI0002131
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002135
ID dre-mir-430a-22
FW MI0002120
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002134
ID dre-mir-430a-21
FW MI0002111
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002133
ID dre-mir-430a-20
FW MI0002111
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0002132
ID dre-mir-430a-19
FW MI0002126
CC Some mir-430 entries collapse in the Zv9 genome assembly, so are
CC merged.
//
AC MI0013245
ID osa-MIR2906a
FW MI0013245
CC The sequence annotated as miR2906 is a fragment of SRP RNA, so
CC is removed.
//
AC MI0013246
ID osa-MIR2906b
FW MI0013246
CC The sequence annotated as miR2906 is a fragment of SRP RNA, so
CC is removed.
//
AC MI0016047
ID hsa-mir-3647
FW MI0016047
CC mir-3647 is a fragment of a snoRNA (SNORD111B -- Langenberger et
CC al, DOI:10.1007/978-3-642-22825-4_1), so is removed.
//
AC MI0017669
ID bfl-mir-4896
FW MI0017669
CC mir-4896 is a fragment of U2 RNA.
//
AC MI0016446
ID smr-mir-3931
FW MI0018489
CC mir-3931 is a chelicerate-specific miRNA that was not cloned frm
CC Strigamia in Rota-Stabelli et al. (Peterson K, pers. comm.).
//
AC MI0005490
ID mmu-mir-297a-5
FW MI0000397
CC miR-297a maps many times to the mouse genome. Sequences without
CC support for mature miRNAs from both arms by deep sequencing are
CC deleted.
//
AC MI0005491
ID mmu-mir-297a-6
FW MI0000397
CC miR-297a maps many times to the mouse genome. Sequences without
CC support for mature miRNAs from both arms by deep sequencing are
CC deleted.
//
AC MI0011685
ID dps-mir-2517a-4
FW MI0011725
CC Merge duplicate loci.
//
AC MI0001707
ID osa-MIR442
FW MI0001707
CC The pattern of reads that map to the MIR442 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001704
ID osa-MIR441a
FW MI0001704
CC The pattern of reads that map to the MIR441 loci from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001705
ID osa-MIR441b
FW MI0001705
CC The pattern of reads that map to the MIR441 loci from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001706
ID osa-MIR441c
FW MI0001706
CC The pattern of reads that map to the MIR441 loci from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001718
ID osa-MIR446
FW MI0001718
CC The pattern of reads that map to the MIR446 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010723
ID osa-MIR2125
FW MI0010723
CC The pattern of reads that map to the MIR2125 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0004678
ID mmu-mir-720
FW MI0004678
CC Schopman et al. show that the sequence annotated as miR-720 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0006654
ID hsa-mir-720
FW MI0006654
CC Schopman et al. show that the sequence annotated as miR-720 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0008855
ID ptr-mir-720
FW MI0008855
CC Schopman et al. show that the sequence annotated as miR-720 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0015141
ID ppy-mir-720
FW MI0015141
CC Schopman et al. show that the sequence annotated as miR-720 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0006437
ID hsa-mir-1280
FW MI0006437
CC Schopman et al. show that the sequence annotated as miR-1280 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0008479
ID ptr-mir-1280
FW MI0008479
CC Schopman et al. show that the sequence annotated as miR-1280 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0015235
ID ppy-mir-1280
FW MI0015235
CC Schopman et al. show that the sequence annotated as miR-1280 is
CC likely to be a fragment of a tRNA, and so is removed from the
CC database (RNA Biol. 2010 7:573-576).
//
AC MI0001440
ID osa-MIR420
FW MI0001440
CC The pattern of reads that map to the MIR420 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0005238
ID osa-MIR813
FW MI0005238
CC The pattern of reads that map to the MIR813 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010724
ID osa-MIR2124h
FW MI0010724
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010722
ID osa-MIR2124i
FW MI0010722
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010721
ID osa-MIR2124g
FW MI0010721
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010720
ID osa-MIR2124f
FW MI0010720
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010719
ID osa-MIR2124e
FW MI0010719
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010718
ID osa-MIR2124d
FW MI0010718
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010717
ID osa-MIR2124c
FW MI0010717
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010716
ID osa-MIR2124b
FW MI0010716
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0010715
ID osa-MIR2124a
FW MI0010715
CC The pattern of reads that map to the MIR2124 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001709
ID osa-MIR445a
FW MI0001709
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001710
ID osa-MIR445b
FW MI0001710
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001711
ID osa-MIR445c
FW MI0001711
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001712
ID osa-MIR445d
FW MI0001712
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001713
ID osa-MIR445e
FW MI0001713
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001714
ID osa-MIR445f
FW MI0001714
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001715
ID osa-MIR445g
FW MI0001715
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001716
ID osa-MIR445h
FW MI0001716
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0001717
ID osa-MIR445i
FW MI0001717
CC The pattern of reads that map to the MIR445 locus from deep
CC sequencing experiments is not consistent with miRNA processing.
CC The miRNA annotation is therefore likely to be incorrect (Chen
CC et al., RNA Biol. 8:538-547).
//
AC MI0005210
ID osa-MIR806a
FW MI0005210
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005211
ID osa-MIR806b
FW MI0005211
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005212
ID osa-MIR806c
FW MI0005212
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005213
ID osa-MIR806d
FW MI0005213
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005214
ID osa-MIR806e
FW MI0005214
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005215
ID osa-MIR806f
FW MI0005215
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005216
ID osa-MIR806g
FW MI0005216
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005217
ID osa-MIR806h
FW MI0005217
CC The pattern of reads that map to the MIR806 locus from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0010712
ID osa-MIR2123a
FW MI0010712
CC The pattern of reads that map to the MIR806/MIR2123 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0010713
ID osa-MIR2123b
FW MI0010713
CC The pattern of reads that map to the MIR806/MIR2123 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0010714
ID osa-MIR2123c
FW MI0010714
CC The pattern of reads that map to the MIR806/MIR2123 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0008246
ID osa-MIR1884a
FW MI0008246
CC The pattern of reads that map to the MIR806/MIR1884 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0008281
ID osa-MIR1884b
FW MI0008281
CC The pattern of reads that map to the MIR806/MIR1884 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005209
ID osa-MIR807a
FW MI0005209
CC The pattern of reads that map to the MIR807 loci from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005218
ID osa-MIR807b
FW MI0005218
CC The pattern of reads that map to the MIR807 loci from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005219
ID osa-MIR807c
FW MI0005219
CC The pattern of reads that map to the MIR807 loci from deep
CC sequencing experiments is more consistent with rasiRNA rather
CC than miRNA processing. The miRNA annotation is therefore likely
CC to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005220
ID osa-MIR808
FW MI0005220
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005221
ID osa-MIR809a
FW MI0005221
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005222
ID osa-MIR809b
FW MI0005222
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005223
ID osa-MIR809c
FW MI0005223
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005224
ID osa-MIR809d
FW MI0005224
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005225
ID osa-MIR809e
FW MI0005225
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005226
ID osa-MIR809f
FW MI0005226
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005227
ID osa-MIR809g
FW MI0005227
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005228
ID osa-MIR809h
FW MI0005228
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005252
ID osa-MIR819a
FW MI0005252
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005253
ID osa-MIR819b
FW MI0005253
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005254
ID osa-MIR819c
FW MI0005254
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005255
ID osa-MIR819d
FW MI0005255
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005256
ID osa-MIR819e
FW MI0005256
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005257
ID osa-MIR819f
FW MI0005257
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005258
ID osa-MIR819g
FW MI0005258
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005259
ID osa-MIR819h
FW MI0005259
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005260
ID osa-MIR819i
FW MI0005260
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005261
ID osa-MIR819j
FW MI0005261
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005262
ID osa-MIR819k
FW MI0005262
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0006188
ID tae-MIR1126
FW MI0006188
CC MIR1126 and MIR1132 are related to the MIR8080/809/819 family.
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0016744
ID hvu-MIR1126
FW MI0016744
CC MIR1126 and MIR1132 are related to the MIR8080/809/819 family.
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0006194
ID tae-MIR1132
FW MI0006194
CC MIR1126 and MIR1132 are related to the MIR8080/809/819 family.
CC The pattern of reads that map to the MIR808/809/819 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005230
ID osa-MIR811a
FW MI0005230
CC The pattern of reads that map to the MIR811/MIR2862 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005231
ID osa-MIR811b
FW MI0005231
CC The pattern of reads that map to the MIR811/MIR2862 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0005232
ID osa-MIR811c
FW MI0005232
CC The pattern of reads that map to the MIR811/MIR2862 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0017250
ID osa-MIR811d
FW MI0017250
CC The pattern of reads that map to the MIR811/MIR2862 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0013024
ID osa-MIR2862
FW MI0013024
CC The pattern of reads that map to the MIR811/MIR2862 loci from
CC deep sequencing experiments is more consistent with rasiRNA
CC rather than miRNA processing. The miRNA annotation is therefore
CC likely to be incorrect (Chen et al., RNA Biol. 8:538-547).
//
AC MI0014337
ID bmo-mir-3281
FW MI0014337
CC The pattern of reads from deep sequencing experiments that map
CC to this locus does not support the annotation of mir-3281 as a
CC microRNA. The entry is therefore removed from the database.
//
AC MI0014440
ID bmo-mir-3379
FW MI0014440
CC The pattern of reads from deep sequencing experiments that map
CC to this locus does not support the annotation of mir-3379 as a
CC microRNA. The entry is therefore removed from the database.
//
AC MI0010832
ID mmu-mir-2182
FW MI0010832
CC miR-2182 is a fragment of the precursor 45S rRNA, and so is
CC removed from the database.
//
AC MI0019410
ID dme-mir-5613
FW MI0019410
CC The pattern of reads mapping to this locus from collated deep
CC sequencing experiments is not consistent with microRNA
CC processing by Drosha and Dicer. The sequence is therefore
CC removed from miRBase.
//
AC MI0019411
ID dme-mir-5614
FW MI0019411
CC The pattern of reads mapping to this locus from collated deep
CC sequencing experiments is not consistent with microRNA
CC processing by Drosha and Dicer. The sequence is therefore
CC removed from miRBase.
//
AC MI0018010
ID mmu-mir-5102
FW MI0018010
CC The sequence annotated as mir-5102 is 80% identical to an
CC annotated 28S rRNA sequence (Refseq:NR_003279.1), and is
CC therefore very unlikely to be a miRNA. The sequence is removed
CC from the database.
//
AC MI0011537
ID bta-mir-2476
FW MI0011537
CC The genomic region flanking the predicted mir-2476 hairpin is
CC annotated as a tRNA by both Rfam and tRNAscan-SE. The mature
CC sequence also matches fragments of tRNAs from the SILVA
CC database. The miRNA annotation is therefore removed from
CC miRBase.
//
AC MI0017998
ID ssc-mir-2476a-1
FW MI0017998
CC The genomic region flanking the predicted mir-2476 hairpin is
CC annotated as a tRNA by both Rfam and tRNAscan-SE. The mature
CC sequence also matches fragments of tRNAs from the SILVA
CC database. The miRNA annotation is therefore removed from
CC miRBase.
//
AC MI0017999
ID ssc-mir-2476a-2
FW MI0017999
CC The genomic region flanking the predicted mir-2476 hairpin is
CC annotated as a tRNA by both Rfam and tRNAscan-SE. The mature
CC sequence also matches fragments of tRNAs from the SILVA
CC database. The miRNA annotation is therefore removed from
CC miRBase.
//
AC MI0018000
ID ssc-mir-2476a-3
FW MI0018000
CC The genomic region flanking the predicted mir-2476 hairpin is
CC annotated as a tRNA by both Rfam and tRNAscan-SE. The mature
CC sequence also matches fragments of tRNAs from the SILVA
CC database. The miRNA annotation is therefore removed from
CC miRBase.
//
AC MI0018020
ID mmu-mir-5111
FW MI0018020
CC The annotated mature miR-5111 sequence appears to be a fragment
CC of tRNAs annotated in the SILVA database. The miRNA annotation
CC is therefore removed from miRBase.
//
AC MI0019039
ID osa-MIR5520
FW MI0019039
CC The pattern of RNAseq reads mapped to this locus do not support
CC the annotation of a microRNA, and the structure of the flanking
CC regions is not a simple hairpin. The annotation is removed from
CC miRBase.
//
AC MI0013950
ID api-mir-971-2
FW MI0013949
CC Two previously annotated mir-971 entries map to the same locus
CC in the AphidBase2 genome assembly, and so are merged.
//
AC MI0013978
ID api-mir-3034-2
FW MI0013977
CC Two previously annotated mir-3034 entries map to the same locus
CC in the AphidBase2 genome assembly, and so are merged.
//
AC MI0013916
ID api-mir-210-2
FW MI0013915
CC Two previously annotated mir-210 entries map to the same locus
CC in the AphidBase2 genome assembly, and so are merged.
//
AC MI0013952
ID api-mir-996-2
FW MI0013951
CC Two previously annotated mir-996 entries map to the same locus
CC in the AphidBase2 genome assembly, and so are merged.
//
AC MI0013931
ID api-mir-307-2
FW MI0013930
CC Two previously annotated mir-307 entries map to the same locus
CC in the AphidBase2 genome assembly, and so are merged.
//
AC MI0014014
ID api-mir-3015c-2
FW MI0014013
CC Two previously annotated mir-3015c entries map to the same locus
CC in the AphidBase2 genome assembly, and so are merged.
//
AC MI0017890
ID ath-MIR5015b
FW MI0017883
CC Two previously annotated MIR5015 entries map to the same locus
CC in the TAIR10 genome assembly, and so are merged.
//
AC MI0017960
ID bdi-MIR5062b
FW MI0017959
CC Two previously annotated MIR5062 entries map to the same locus
CC in the v1.0 genome assembly, and so are merged.
//
AC MI0018217
ID bdi-MIR390b
FW MI0018085
CC Two previously annotated MIR390 entries map to the same locus
CC in the v1.0 genome assembly, and so are merged.
//
AC MI0018237
ID bdi-MIR396f
FW MI0018125
CC Two previously annotated MIR396 (b and f) entries map to the
CC same locus in the v1.0 genome assembly, and so are merged.
//
AC MI0018099
ID bdi-MIR397b
FW MI0011565
CC Two previously annotated MIR397 entries map to the same locus in
CC the v1.0 genome assembly, and so are merged.
//
AC MI0018228
ID bdi-MIR398c
FW MI0018116
CC Two previously annotated MIR398 entries map to the same locus in
CC the v1.0 genome assembly, and so are merged.
//
AC MI0018214
ID bdi-MIR164d
FW MI0018094
CC Two previously annotated MIR164 entries map to the same locus in
CC the v1.0 genome assembly, and so are merged.
//
AC MI0018218
ID bdi-MIR395i
FW MI0018088
CC Two previously annotated MIR395 entries map to the same locus in
CC the v1.0 genome assembly, and so are merged.
//
AC MI0017616
ID bfl-mir-4862b
FW MI0017615
CC Two previously annotated mir-4862 entries map to the same locus
CC in the JGI2.0 genome assembly, and so are merged.
//
AC MI0017655
ID bfl-mir-4885b
FW MI0017654
CC Two previously annotated mir-4885 entries map to the same locus
CC in the JGI2.0 genome assembly, and so are merged.
//
AC MI0017671
ID bfl-mir-4897b
FW MI0017670
CC Two previously annotated mir-4897 entries map to the same locus
CC in the JGI2.0 genome assembly, and so are merged.
//
AC MI0012210
ID bta-mir-219-2
FW MI0009781
CC Two previously annotated mir-219 entries map to the same locus
CC in the UMD3.1 genome assembly, and so are merged.
//
AC MI0011422
ID bta-mir-2384-2
FW MI0011421
CC Two previously annotated mir-2384 entries map to the same locus
CC in the UMD3.1 genome assembly, and so are merged.
//
AC MI0011489
ID bta-mir-2424-2
FW MI0011474
CC Two previously annotated mir-2424 entries map to the same locus
CC in the UMD3.1 genome assembly, and so are merged.
//
AC MI0013078
ID bta-mir-2902-2
FW MI0013077
CC Two previously annotated mir-2909 entries map to the same locus
CC in the UMD3.1 genome assembly, and so are merged.
//
AC MI0011499
ID bta-mir-2445
FW MI0011499
CC The previously annotated mir-2445 sequence does not adopt a
CC strong miRNA-like hairpin structure, and the mature sequence
CC does not match exactly in the UMD3.1 genome assembly. The entry
CC is therefore removed.
//
AC MI0015552
ID cin-mir-4010-2
FW MI0015551
CC Two previously annotated mir-4010 entries map to the same locus
CC in the JGI2 genome assembly, and so are merged.
//
AC MI0015503
ID cin-mir-4000a-3
FW MI0015504
CC Three previously annotated mir-4000a entries map to two loci in
CC the JGI2 genome assembly, and so are merged.
//
AC MI0013616
ID cqu-mir-1890-2
FW MI0013615
CC Two previously annotated mir-1890 entries map to a single locus
CC in the CpipJ1 genome assembly, and so are merged.
//
AC MI0013595
ID cqu-mir-92-2
FW MI0013594
CC Two previously annotated mir-92 entries map to a single locus in
CC the CpipJ1 genome assembly, and so are merged.
//
AC MI0010097
ID cte-mir-79
FW MI0010052
CC The previously annotated mir-9 and mir-79 entries map to a
CC single locus in the JGI1.0 genome assembly, and so are merged.
//
AC MI0012249
ID dpu-mir-79
FW MI0012252
CC The previously annotated mir-9 and mir-79 entries map to a
CC single locus in the JGI1.0 genome assembly, and so are merged.
//
AC MI0003261
ID fru-mir-142b
FW MI0003223
CC Two previously annotated mir-142 entries map to a single locus
CC in the FUGU5 genome assembly, and so are merged.
//
AC MI0003375
ID fru-mir-181b-2
FW MI0003331
CC Two previously annotated mir-181b entries map to a single locus
CC in the FUGU5 genome assembly, and so are merged.
//
AC MI0015965
ID gga-mir-146c-2
FW MI0007561
CC Two previously annotated mir-146c entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0003697
ID gga-mir-147-2
FW MI0003696
CC Two previously annotated mir-147 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007294
ID gga-mir-1569-1
FW MI0007295
CC Two previously annotated mir-1569 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007337
ID gga-mir-1609-2
FW MI0007336
CC Two previously annotated mir-1609 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007342
ID gga-mir-1613-2
FW MI0007341
CC Two previously annotated mir-1613 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007387
ID gga-mir-1654-2
FW MI0007386
CC Two previously annotated mir-1654 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007465
ID gga-mir-1727-2
FW MI0007464
CC Two previously annotated mir-1727 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0005000
ID gga-mir-757-2
FW MI0004999
CC Two previously annotated mir-757 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007485
ID gga-mir-1745-2
FW MI0007484
CC Two previously annotated mir-1745 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0015966
ID gga-mir-222-2
FW MI0001177
CC Two previously annotated mir-222 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0007495
ID gga-mir-1753-2
FW MI0007494
CC Two previously annotated mir-1753 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0015392
ID gga-mir-3538-2
FW MI0015391
CC Two previously annotated mir-3538 entries map to a single locus
CC in the GalGal4 genome assembly, and so are merged.
//
AC MI0017872
ID hsa-mir-4482-2
FW MI0016843
CC Two previously annotated mir-4482 entries map to one locus in
CC the GRCh37 genome assembly, so are merged.
//
AC MI0010841
ID dre-mir-2190-1
FW MI0010841
CC The mature miR-2190 sequence matches a fragment of LSU rRNA, and
CC the pattern of reads derived from the locus is not consistent
CC with microRNA processing (Wei et al. RNA 2012 18:915-929).
//
AC MI0019586
ID dre-mir-2190-2
FW MI0019586
CC The mature miR-2190 sequence matches a fragment of LSU rRNA, and
CC the pattern of reads derived from the locus is not consistent
CC with microRNA processing (Wei et al. RNA 2012 18:915-929).
//
AC MI0019587
ID dre-mir-2190-3
FW MI0019587
CC The mature miR-2190 sequence matches a fragment of LSU rRNA, and
CC the pattern of reads derived from the locus is not consistent
CC with microRNA processing (Wei et al. RNA 2012 18:915-929).
//
AC MI0019588
ID dre-mir-2190-4
FW MI0019588
CC The mature miR-2190 sequence matches a fragment of LSU rRNA, and
CC the pattern of reads derived from the locus is not consistent
CC with microRNA processing (Wei et al. RNA 2012 18:915-929).
//
AC MI0020960
ID mes-MIR160
FW MI0020960
CC This sequence is not present in the Cassava4 genome assembly.
CC Patanun et al. (2012) have predicted MIR166 family members based
CC on the updated genome assembly, so this sequence is removed.
//
AC MI0020961
ID mes-MIR166
FW MI0020961
CC This sequence is not present in the Cassava4 genome assembly.
CC Patanun et al. (2012) have predicted MIR166 family members based
CC on the updated genome assembly, so this sequence is removed.
//
AC MI0018013
ID mmu-mir-5105
FW MI0018013
CC The annotated miR-5105 sequence has been shown to derive from a
CC fragment of LSU rRNA (Castellano and Stebbing, NAR 2013,
CC PMID:23325850) and is removed from the database.
//
AC MI0019608
ID sha-mir-5105
FW MI0019608
CC The annotated miR-5105 sequence has been shown to derive from a
CC fragment of LSU rRNA (Castellano and Stebbing, NAR 2013,
CC PMID:23325850) and is removed from the database.
//
AC MI0018018
ID mmu-mir-5109
FW MI0018018
CC The annotated miR-5109 sequence has been shown to derive from a
CC fragment of LSU rRNA (Castellano and Stebbing, NAR 2013,
CC PMID:23325850) and is removed from the database.
//
AC MI0018005
ID mmu-mir-5097
FW MI0018005
CC The sequence annotated as miR-5097 derives from a fragment of a
CC tRNA, and is neither processed by Dicer nor loaded into Ago2
CC (Castellano and Stebbing, NAR 2013, PMID:23325850). It is
CC therefore likely a misannotation.
//
AC MI0009962
ID mmu-mir-1965
FW MI0009962
CC The sequences annotated as miR-1965, miR-1935, miR-1186 and
CC miR-1196 have been shown to derive from DGCR8-independent
CC processing of a long hairpin formed by a transcribed Alu/B1 SINE
CC element (Castellano and Stebbing, NAR 2013, PMID:23325850).
CC These sequences are therefore likely to be mis-annotations.
//
AC MI0009924
ID mmu-mir-1935
FW MI0009924
CC The sequences annotated as miR-1965, miR-1935, miR-1186 and
CC miR-1196 have been shown to derive from DGCR8-independent
CC processing of a long hairpin formed by a transcribed Alu/B1 SINE
CC element (Castellano and Stebbing, NAR 2013, PMID:23325850).
CC These sequences are therefore likely to be mis-annotations.
//
AC MI0006284
ID mmu-mir-1186a
FW MI0006284
CC The sequences annotated as miR-1965, miR-1935, miR-1186 and
CC miR-1196 have been shown to derive from DGCR8-independent
CC processing of a long hairpin formed by a transcribed Alu/B1 SINE
CC element (Castellano and Stebbing, NAR 2013, PMID:23325850).
CC These sequences are therefore likely to be mis-annotations.
//
AC MI0014705
ID mmu-mir-1186b
FW MI0014705
CC The sequences annotated as miR-1965, miR-1935, miR-1186 and
CC miR-1196 have been shown to derive from DGCR8-independent
CC processing of a long hairpin formed by a transcribed Alu/B1 SINE
CC element (Castellano and Stebbing, NAR 2013, PMID:23325850).
CC These sequences are therefore likely to be mis-annotations.
//
AC MI0006304
ID mmu-mir-1196
FW MI0006304
CC The sequences annotated as miR-1965, miR-1935, miR-1186 and
CC miR-1196 have been shown to derive from DGCR8-independent
CC processing of a long hairpin formed by a transcribed Alu/B1 SINE
CC element (Castellano and Stebbing, NAR 2013, PMID:23325850).
CC These sequences are therefore likely to be mis-annotations.
//
AC MI0018024
ID mmu-mir-5115
FW MI0018024
CC The annotated miR-5115 sequence has been shown to derive from a
CC fragment of LSU rRNA (Castellano and Stebbing, NAR 2013,
CC PMID:23325850) and is removed from the database.
//
AC MI0018026
ID mmu-mir-5117
FW MI0018026
CC The abundance of reads mapping to the miR-5117 sequence has been
CC shown to be independent of Dicer and DGCR8, and the sequences
CC are not found in Ago2 IP experiments (Castellano and Stebbing,
CC NAR 2013, PMID:23325850). It is therefore likely a
CC misannotation.
//
AC MI0014089
ID mmu-mir-3096a
FW MI0014089
CC The abundance of reads mapping to the miR-3096 sequence has been
CC shown to be independent of Dicer and DGCR8, and the sequences
CC are not found in Ago2 IP experiments (Castellano and Stebbing,
CC NAR 2013, PMID:23325850). It is therefore likely a
CC misannotation.
//
AC MI0016969
ID mmu-mir-3096b
FW MI0016969
CC The abundance of reads mapping to the miR-3096 sequence has been
CC shown to be independent of Dicer and DGCR8, and the sequences
CC are not found in Ago2 IP experiments (Castellano and Stebbing,
CC NAR 2013, PMID:23325850). It is therefore likely a
CC misannotation.
//
AC MI0007509
ID gga-mir-1766-2
FW MI0007508
CC The previously annotated mir-1766-1 and mir-1766-2 loci map to
CC the same location in the Gallus-gallus-4 assembly, so are
CC merged.
//
AC MI0005628
ID mtr-MIR166h
FW MI0001740
CC MIR166a and MIR166h map to the same locus in the Mt3.5.2 genome
CC assembly, so the entries are merged.
//
AC MI0001742
ID mtr-MIR169b
FW MI0001741
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0005624
ID mtr-MIR169i
FW MI0005623
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0005630
ID mtr-MIR169m
FW MI0005579
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0005631
ID mtr-MIR169l
FW MI0005578
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0005632
ID mtr-MIR169k
FW MI0005577
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0005636
ID mtr-MIR169n
FW MI0005623
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0005637
ID mtr-MIR169o
FW MI0005623
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0019683
ID mtr-MIR169r
FW MI0005623
CC The mtr-MIR169 entries in miRBase 19 map to only 11 loci in the
CC MT3.5.2 genome assembly. The entries have therefore been
CC rationalised and merged in miRBase 20, and some loci renamed.
//
AC MI0012051
ID mtr-MIR2088b
FW MI0010545
CC The two MIR2088 sequences in miRBase 19 map to the same locus in
CC the Mt3.5.2 genome assembly so are merged in miRBase 20.
//
AC MI0011871
ID mtr-MIR2585e
FW MI0011870
CC The 2 MIR2585 sequences in miRBase 19 map to one locus in the
CC MT3.5.2 genome assembly, so are merged.
//
AC MI0011835
ID mtr-MIR2111g
FW MI0011841
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011837
ID mtr-MIR2111i
FW MI0011836
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011904
ID mtr-MIR2111b
FW MI0019095
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011840
ID mtr-MIR2111l
FW MI0011839
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011906
ID mtr-MIR2111d
FW MI0011843
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011845
ID mtr-MIR2111q
FW MI0011844
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011903
ID mtr-MIR2111a
FW MI0019095
CC The MIR2111 loci in miRBase 19 overlap in the Mt3.5.2 genome
CC assembly. The entries are rationalised and merged in miRBase 20,
CC leading to several entries being renamed.
//
AC MI0011831
ID mtr-MIR2594b
FW MI0011830
CC Two MIR2594 sequences map to the same locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0011864
ID mtr-MIR2609c
FW MI0011862
CC Two MIR2609 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0011873
ID mtr-MIR2612b
FW MI0011872
CC Two MIR2612 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0011892
ID mtr-MIR2624b
FW MI0011891
CC Two MIR2624 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0011955
ID mtr-MIR2640b
FW MI0011954
CC Two MIR2640 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0011960
ID mtr-MIR2644b
FW MI0011959
CC Two MIR2644 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0012005
ID mtr-MIR2657b
FW MI0012004
CC Two MIR2657 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0012014
ID mtr-MIR2660b
FW MI0012013
CC Two MIR2660 loci in miRBase 19 map to one locus in the Mt3.5.2
CC genome assembly, so are merged in miRBase 20.
//
AC MI0005635
ID mtr-MIR171g
FW MI0005619
CC Two MIR171 sequences map to the same locus in the Mt3.5.2 genome
CC assembly, so are merged in miRBase 20.
//
AC MI0011859
ID mtr-MIR2606c
FW MI0011858
CC Two MIR2606 sequences in miRBase 19 map to the same locus in the
CC Mt3.5.2 genome assembly, so are merged in miRBase 20.
//
AC MI0012044
ID mtr-MIR2675b
FW MI0012043
CC Two MIR2675 sequences in miRBase 19 map to the same locus in the
CC Mt3.5.2 genome assembly, so are merged in miRBase 20.
//
AC MI0005633
ID mtr-MIR395r
FW MI0005079
CC Some of the MIR395 sequences in miRBase 19 map to the same locus
CC in the Mt3.5.2 genome assembly. The entries are rationalised and
CC merged in miRBase 20.
//
AC MI0005078
ID mtr-MIR395k
FW MI0005073
CC Some of the MIR395 sequences in miRBase 19 map to the same locus
CC in the Mt3.5.2 genome assembly. The entries are rationalised and
CC merged in miRBase 20.
//
AC MI0005598
ID mtr-MIR395q
FW MI0005071
CC Some of the MIR395 sequences in miRBase 19 map to the same locus
CC in the Mt3.5.2 genome assembly. The entries are rationalised and
CC merged in miRBase 20.
//
AC MI0018483
ID mtr-MIR5219b
FW MI0018283
CC Two MIR5219 sequences in miRBase 19 map to the same locus in the
CC Mt3.5.2 genome assembly. The entries are merged in miRBase 20.
//
AC MI0018287
ID mtr-MIR5223b
FW MI0018286
CC Two MIR5223 sequences in miRBase 19 map to the same locus in the
CC Mt3.5.2 genome assembly. The entries are merged in miRBase 20.
//
AC MI0018263
ID mtr-MIR2592aa
FW MI0018262
CC Some MIR2592 sequences in miRBase 19 map to the same locus in
CC the Mt3.5.2 genome assembly. The entries are rationalised,
CC merged and renamed in miRBase 20.
//
AC MI0018269
ID mtr-MIR2592ag
FW MI0018268
CC Some MIR2592 sequences in miRBase 19 map to the same locus in
CC the Mt3.5.2 genome assembly. The entries are rationalised,
CC merged and renamed in miRBase 20.
//
AC MI0018273
ID mtr-MIR2592ak
FW MI0018274
CC Some MIR2592 sequences in miRBase 19 map to the same locus in
CC the Mt3.5.2 genome assembly. The entries are rationalised,
CC merged and renamed in miRBase 20.
//
AC MI0018311
ID mtr-MIR2592bh
FW MI0018300
CC Some MIR2592 sequences in miRBase 19 map to the same locus in
CC the Mt3.5.2 genome assembly. The entries are rationalised,
CC merged and renamed in miRBase 20.
//
AC MI0019290
ID hsa-mir-5686
FW MI0019290
CC The sequence annotated as mir-5686 is a low complexity repeat.
CC There is no support for microRNA processing from available deep
CC sequencing data.
//
AC MI0020982
ID mse-mir-981-2
FW MI0021023
CC Two annotated mir-981 loci map to the same locus in the Msex 1.0
CC genome assembly, so are merged.
//
AC MI0002211
ID ptc-MIR162c
FW MI0002210
CC Two MIR162 loci from miRBase 19 map to a single location in the
CC JGI v2 genome assembly, so are merged in miRBase 20.
//
AC MI0002389
ID ptc-MIR479
FW MI0007032
CC The MIR171l and MIR479 loci from miRBase 19 map to a single
CC location in the JGI v2 genome assembly, so are merged in miRBase
CC 20.
//
AC MI0002395
ID ptc-MIR481d
FW MI0002396
CC Five MIR481 sequences in miRBase 19 map to only four loci in the
CC JGI v2 genome assembly. The entries are therefore rationalised
CC in miRBase 20.
//
AC MI0002197
ID ptc-MIR159c
FW MI0002195
CC Six MIR159 sequences in miRBase 19 map to only five loci in the
CC JGI v2 genome assembly. The entries are therefore rationalised
CC in miRBase 20.
//
AC MI0002391
ID ptc-MIR480b
FW MI0002390
CC Two MIR480 sequences in miRBase 19 map to only one locus in the
CC JGI v2 genome assembly. The entries are therefore merged in
CC miRBase 20.
//
AC MI0002382
ID ptc-MIR478n
FW MI0002381
CC Six identical MIR478 sequences in miRBase 19 map to only five
CC loci in the JGI v2 genome assembly. The entries are therefore
CC rationalised in miRBase 20.
//
AC MI0022046
ID ptc-MIR403d
FW MI0005115
CC Two identical MIR403 sequences in miRBase 19 map to only one
CC locus in the JGI v2 genome assembly. The entries are therefore
CC merged in miRBase 20.
//
AC MI0002342
ID ptc-MIR399e
FW MI0002341
CC Two identical MIR399 sequences in miRBase 19 map to only one
CC locus in the JGI v2 genome assembly. The entries are therefore
CC merged in miRBase 20.
//
AC MI0002340
ID ptc-MIR399c
FW MI0002339
CC Two identical MIR399 sequences in miRBase 19 map to only one
CC locus in the JGI v2 genome assembly. The entries are therefore
CC merged in miRBase 20.
//
AC MI0002312
ID ptc-MIR393d
FW MI0002311
CC Two identical MIR393 sequences in miRBase 19 map to only one
CC locus in the JGI v2 genome assembly. The entries are therefore
CC merged in miRBase 20.
//
AC MI0002367
ID ptc-MIR476c
FW MI0002366
CC Two identical MIR476 sequences in miRBase 19 map to only one
CC locus in the JGI v2 genome assembly. The entries are therefore
CC merged in miRBase 20.
//
AC MI0002286
ID ptc-MIR171j
FW MI0005114
CC Two identical MIR171 sequences in miRBase 19 map to only one
CC locus in the JGI v2 genome assembly. The entries are therefore
CC merged in miRBase 20.
//
AC MI0003128
ID hsa-mir-511-2
FW MI0003127
CC Two mir-511 sequences in miRBase 19 map to only one locus in the
CC patched GRCh37.p10 genome assembly. The entries are merged in
CC miRBase 20.
//
AC MI0012634
ID peu-MIR2911
FW MI0012634
CC The sequence annotated as mature miR2911 is a fragment of rRNA,
CC so is removed from miRBase 20.
//
AC MI0021418
ID nta-MIR2911
FW MI0021418
CC The sequence annotated as mature miR2911 is a fragment of rRNA,
CC so is removed from miRBase 20.
//
AC MI0022263
ID han-MIR2911
FW MI0022263
CC The sequence annotated as mature miR2911 is a fragment of rRNA,
CC so is removed from miRBase 20.
//
AC MI0008269
ID osa-MIR1423b
FW MI0006963
CC Two MIR1423 sequences in miRBase 19 map to a single locus in the
CC MSU7 genome assembly. The entries are merged in miRBase 20.
//
AC MI0009715
ID osa-MIR1318
FW MI0006972
CC The sequences annotated as MIR1318 and MIR1432 in miRBase 19 map
CC to a single locus in the MSU7 genome assembly. The entries are
CC merged in miRBase 20.
//
AC MI0001106
ID osa-MIR166j
FW MI0001144
CC Two MIR166 sequences in miRBase 19 map to a single locus in the
CC MSU7 genome assembly. The entries are merged in miRBase 20.
//
AC MI0009714
ID osa-MIR1317
FW MI0008292
CC The sequences annotated as MIR1317 and MIR1882e in miRBase 19
CC map to a single locus in the MSU7 genome assembly. The entries
CC are merged in miRBase 20.
//
AC MI0001699
ID osa-MIR439i
FW MI0001691
CC Five MIR439 sequences in miRBase 19 map to four loci in the MSU7
CC genome assembly. The entries are rationalised in miRBase 20.
//
AC MI0007051
ID osa-MIR827c
FW MI0010490
CC osa-MIR827c (Lu et al. Plant J 2008) was a predicted locus with
CC low sequence similarity to other MIR827 sequences, and which has
CC not been seen in subsequent RNAseq experiments. The sequence is
CC deleted from miRBase 20.
//
AC MI0010568
ID osa-MIR827b
FW MI0010490
CC Two MIR827 sequences in miRBase 19 map to one locus in the MSU7
CC genome assembly. The entries are merged in miRBase 20.
//
AC MI0001702
ID osa-MIR396d
FW MI0001703
CC Two MIR396 sequences in miRBase 19 map to one locus in the MSU7
CC genome assembly. The entries are merged in miRBase 20.
//
AC MI0015779
ID aly-MIR399j
FW MI0014637
CC Two MIR399 sequences in miRBase 19 map to one locus in the v1.0
CC genome assembly. The entries are merged in miRBase 20.
//
AC MI0008268
ID osa-MIR1867
FW MI0008268
CC The pattern of deep sequencing reads derived from the MIR1867
CC locus is not consistent with miRNA processing. The sequence is
CC removed from miRBase 20.
//
AC MI0019725
ID gma-MIR1513d
FW MI0019725
CC The predicted structure of the region flanking the proposed
CC mature miRNA sequence doesnot adopt a pre-miRNA-like hairpin.
CC The sequence is removed from miRBase 20.
//
AC MI0005793
ID pta-MIR783
FW MI0005113
CC The pattern of deep sequencing reads mapping to the MIR783 locus
CC is not consistent with miRNA processing. The entry is removed
CC from miRBase 20.
//
AC MI0022101
ID pde-MIR783
FW MI0005113
CC The pattern of deep sequencing reads mapping to the MIR783 locus
CC is not consistent with miRNA processing. The entry is removed
CC from miRBase 20.
//
AC MI0005113
ID ath-MIR783
FW MI0005113
CC The pattern of deep sequencing reads mapping to the MIR783 locus
CC is not consistent with miRNA processing. The entry is removed
CC from miRBase 20.
//
AC MI0011431
ID bta-mir-2391
FW MI0011431
CC The putative mature sequence is low complexity (AAAAAA seed),
CC and the hairpin prediction is weak. The entry is removed from
CC miRBase 20.
//
AC MI0021590
ID mmu-mir-6243
FW MI0021590
CC The sequence annotated as miR-6243 is a fragment of LSU rRNA.
CC The entry is removed from miRBase 20.
//
AC MI0016077
ID hsa-mir-3676
FW MI0016077
CC The sequence annotated as miR-3676 is a fragment of a tRNA, and
CC the deep sequencing reads mapping to the predicted hairpin do
CC not support miRNA processing. The entry is removed from miRBase
CC 20.
//
AC MI0015918
ID ssc-mir-4333
FW MI0015918
CC The sequence annotated as mir-4333 overlaps the well-conserved
CC snoRNA SNORA53. The entry is removed from miRBase 20.
//
AC MI0015930
ID ssc-mir-4336
FW MI0015930
CC The sequence annotated as mir-4336 overlaps the well-conserved
CC snoRNA SNORA18. The entry is removed from miRBase 20.
//
AC MI0023528
ID sbi-MIR169r
FW MI0001558
CC Two MIR169 sequences map to the same locus in the Sorghum genome
CC assembly. The entries are merged in miRBase 20.
//
AC MI0010197
ID spu-mir-79
FW MI0010189
CC The previously annotated mir-9 and mir-79 sequences derive from
CC the same locus. The entries are merged in miRBase 20.
//
AC MI0013334
ID bma-mir-79
FW MI0013326
CC The previously annotated mir-9 and mir-79 sequences derive from
CC the same locus. The entries are merged in miRBase 20.
//
AC MI0009707
ID pta-MIR1310
FW MI0009707
CC The mature miR1310 exactly matches a fragment of LSU rRNA. The
CC corresponding entry is removed from miRBase 21.
//
AC MI0022111
ID pde-MIR1310
FW MI0022111
CC The mature miR1310 exactly matches a fragment of LSU rRNA. The
CC corresponding entry is removed from miRBase 21.
//
AC MI0022262
ID han-MIR1310
FW MI0022262
CC The mature miR1310 exactly matches a fragment of LSU rRNA. The
CC corresponding entry is removed from miRBase 21.
//
AC MI0022569
ID cln-MIR1310
FW MI0022569
CC The mature miR1310 exactly matches a fragment of LSU rRNA. The
CC corresponding entry is removed from miRBase 21.
//
AC MI0005711
ID cre-MIR916
FW MI0005711
CC The region flanking the putative miR916 sequence is predicted to
CC be a tRNA with high confidence by tRNAscan-SE. The sequence is
CC therefore removed in miRBase 21.
//
AC MI0023461
ID bma-mir-5861-2
FW MI0023460
CC Two previous mir-5861 annotations collapse to a single locus in
CC the v3 genome assembly.
//
AC MI0026295
ID bma-mir-268-2
FW MI0026294
CC Three previous mir-268 annotations collapse to a single locus in
CC the v3 genome assembly.
//
AC MI0026296
ID bma-mir-268-3
FW MI0026294
CC Three previous mir-268 annotations collapse to a single locus in
CC the v3 genome assembly.
//
AC MI0026302
ID bma-mir-36-3
FW MI0026300
CC Five previous mir-36 annotations collapse to two loci in the v3
CC genome assembly.
//
AC MI0026303
ID bma-mir-36-4
FW MI0026300
CC Five previous mir-36 annotations collapse to two loci in the v3
CC genome assembly.
//
AC MI0026304
ID bma-mir-36-5
FW MI0026300
CC Five previous mir-36 annotations collapse to two loci in the v3
CC genome assembly.
//
AC MI0023436
ID bma-mir-5840-2
FW MI0023435
CC Two previous mir-5840 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023463
ID bma-mir-5862-2
FW MI0023462
CC Two previous mir-5862 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023465
ID bma-mir-5863-2
FW MI0023464
CC Two previous mir-5863 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023445
ID bma-mir-5847-3
FW MI0023443
CC Three previous mir-5847 annotations collapse to two loci in the
CC v3 genome assembly.
//
AC MI0023487
ID bma-mir-5877-2
FW MI0023486
CC Two previous mir-5877 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023495
ID bma-mir-5881c
FW MI0023494
CC Three previous mir-5881 annotations collapse to two loci in the
CC v3 genome assembly.
//
AC MI0023498
ID bma-mir-5882a-3
FW MI0023496
CC Three previous mir-5882a annotations collapse to two loci in the
CC v3 genome assembly.
//
AC MI0023501
ID bma-mir-5882b-3
FW MI0023499
CC Three previous mir-5882b annotations collapse to two loci in the
CC v3 genome assembly.
//
AC MI0023504
ID bma-mir-5883-3
FW MI0023502
CC Three previous mir-5883 annotations collapse to two loci in the
CC v3 genome assembly.
//
AC MI0023475
ID bma-mir-5872-2
FW MI0023474
CC Six previous mir-5872 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023476
ID bma-mir-5872-3
FW MI0023474
CC Six previous mir-5872 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023477
ID bma-mir-5872-4
FW MI0023474
CC Six previous mir-5872 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023478
ID bma-mir-5872-5
FW MI0023474
CC Six previous mir-5872 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023479
ID bma-mir-5872-6
FW MI0023474
CC Six previous mir-5872 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023481
ID bma-mir-5873-2
FW MI0023480
CC Three previous mir-5873 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0023482
ID bma-mir-5873-3
FW MI0023480
CC Three previous mir-5873 annotations collapse to one locus in the
CC v3 genome assembly.
//
AC MI0011551
ID bta-mir-2487
FW MI0011551
CC The annotated miR-2487 mature sequence is a fragment of LSU
CC rRNA, so is removed from miRBase 21.
//
AC MI0015378
ID gga-mir-3527
FW MI0015378
CC The sequence annotated as mir-3527 maps to the chicken
CC mitochondrial DNA sequence. It is removed in miRBase 21.
//
AC MI0007291
ID gga-mir-1566
FW MI0007291
CC The submitted mir-1566 sequence does not match to either the
CC assembled chicken genome (galGal4.0), any unmapped contigs, or
CC any chicken sequence in the Trace Archive (2014-04-07). The
CC sequence is removed from miRBase 21.
//
AC MI0010156
ID sko-mir-79
FW MI0010148
CC mir-9 and mir-79 map to a single locus in the Skow_1.0 genome
CC assembly, so are merged.
//
AC MI0017547
ID sko-mir-125b
FW MI0010163
CC mir-125a and mir-125b map to a single locus in the Skow_1.0
CC genome assembly, so are merged.
//
AC MI0019600
ID sha-mir-716a
FW MI0019600
CC miR-716 is a fragment of LSU rRNA, so is removed from miRBase
CC 21.
//
AC MI0019618
ID sha-mir-716b
FW MI0019618
CC miR-716 is a fragment of LSU rRNA, so is removed from miRBase
CC 21.
//
AC MI0000334
ID cel-mir-257
FW MI0000334
CC The annotation of cel-mir-257 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0000335
ID cel-mir-258-1
FW MI0000335
CC The annotation of cel-mir-258 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0010691
ID cel-mir-258-2
FW MI0010691
CC The annotation of cel-mir-258 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0000337
ID cel-mir-260
FW MI0000337
CC The annotation of cel-mir-260 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0000339
ID cel-mir-262
FW MI0000339
CC The annotation of cel-mir-262 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0000752
ID cel-mir-353
FW MI0000752
CC The annotation of cel-mir-353 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0001390
ID cbr-mir-353
FW MI0001390
CC The annotation of cel-mir-353 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0010964
ID cel-mir-2214
FW MI0010964
CC The annotation of cel-mir-2214 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0011009
ID cbr-mir-2214
FW MI0011009
CC The annotation of cel-mir-2214 as a microRNA was questioned by
CC Jan et al (Nature 2011 469:97-101). The pattern of reads from
CC deep sequencing datasets aggregated in miRBase and mapping to
CC the locus is not consistent with microRNA processing. The
CC sequence is removed from miRBase 21.
//
AC MI0022085
ID bmo-mir-6495
FW MI0022085
CC The sequence reported as miR-6495 is a fragment of LSU rRNA. The
CC entry is removed from miRBase 21.
//
AC MI0022086
ID bmo-mir-6496
FW MI0022086
CC The sequence reported as miR-6496 is a fragment of LSU rRNA. The
CC entry is removed from miRBase 21.
//
AC MI0022067
ID mja-mir-6490
FW MI0022067
CC The sequence reported as miR-6490 appears to derive from a
CC fragment of LSU rRNA. The entry is removed from miRBase 21.
//
AC MI0009929
ID mmu-mir-1940
FW MI0009929
CC The sequence reported as miR-1940 appears to be a fragment of
CC the snoRNA SCARNA4. The pattern of reads mapping to the locus is
CC also not consistent with microRNA processing (Kozomara and
CC Griffiths-Jones, NAR 2014 42:D68-D73). The entry is removed from
CC miRBase 21.
//
AC MI0011455
ID bta-mir-1940
FW MI0009929
CC The sequence reported as miR-1940 appears to be a fragment of
CC the snoRNA SCARNA4. The pattern of reads mapping to the mouse
CC locus is also not consistent with microRNA processing (Kozomara
CC and Griffiths-Jones, NAR 2014 42:D68-D73). The entry is removed
CC from miRBase 21.
//
AC MI0016070
ID hsa-mir-3669
FW MI0016070
CC The putative hairpin precursor mir-3669 is mostly comprised of
CC an AU simple repeat. The hairpin structure prediction is
CC therefore not useful. Such simple repeats should not be
CC annotated as microRNAs without significant additional
CC experimental evidence. In this case, there are insufficient
CC reads mapping to the locus from aggregated deep sequencing
CC experiments. The entry is therefore removed from miRBase 21.
//
AC MI0016074
ID hsa-mir-3673
FW MI0016074
CC The putative hairpin precursor mir-3673 is mostly comprised of
CC an AU simple repeat. The hairpin structure prediction is
CC therefore not useful. Such simple repeats should not be
CC annotated as microRNAs without significant additional
CC experimental evidence. In this case, there are insufficient
CC reads mapping to the locus from aggregated deep sequencing
CC experiments. The entry is therefore removed from miRBase 21.
//
AC MI0015976
ID hsa-mir-1270-2
FW MI0006407
CC The two previously annotated mir-1270 sequences map to a single
CC locus in the GRCh38 genome assembly. The entries are merged in
CC miRBase 21.
//
AC MI0026414
ID hsa-mir-7112-2
FW MI0022963
CC The two previously annotated mir-7112 sequences map to a single
CC locus in the GRCh38 genome assembly. The entries are merged in
CC miRBase 21.
//
AC MI0023562
ID hsa-mir-6077-2
FW MI0020354
CC The two previously annotated mir-6077 sequences map to a single
CC locus in the GRCh38 genome assembly. The entries are merged in
CC miRBase 21.
//
AC MI0014243
ID hsa-mir-3118-5
FW MI0014131
CC The six previously annotated mir-3118 sequences map to four loci
CC in the GRCh38 genome assembly. The entries are rationalised in
CC miRBase 21.
//
AC MI0015981
ID hsa-mir-3118-6
FW MI0014131
CC The six previously annotated mir-3118 sequences map to four loci
CC in the GRCh38 genome assembly. The entries are rationalised in
CC miRBase 21.
//
AC MI0015953
ID aga-mir-375-2
FW MI0008310
CC Two annotated mir-375 map to only one location in the AgamP3
CC genome assembly. The two sequences are merged in miRBase 21.
//
AC MI0015954
ID ame-mir-10-2
FW MI0005727
CC Two previously annotated mir-10 sequences map to a single locus
CC in the AMEL4.5 genome assembly. The entries are merged in
CC miRBase 21.
//
AC MI0016458
ID ata-MIR169
FW MI0016458
CC The MIR169 sequence computationally predicted from EST data
CC (Dryanova et al, Genome 2008 51:433-443) does not match the
CC ASM34733v1 genome assembly. The sequence is deleted from miRBase
CC 21.
//
AC MI0016462
ID ata-MIR172
FW MI0016462
CC The MIR172 sequence computationally predicted from EST data
CC (Dryanova et al, Genome 2008 51:433-443) does not match the
CC ASM34733v1 genome assembly. The sequence is deleted from miRBase
CC 21.
//
AC MI0010114
ID lgi-mir-79
FW MI0010105
CC The sequences annotated as mir-9 and mir-79 map to the same
CC locus in the Helro1 genome assembly. The entries are merged in
CC miRBase 21.
//
AC MI0009699
ID dya-mir-263b-2
FW MI0009687
CC Two mir-263b sequences map to a single locus in the caf1 genome
CC assembly. The entries are merged in miRBase 21.
//
AC MI0009656
ID dya-mir-315-2
FW MI0009685
CC Two mir-315 sequences map to a single locus in the caf1 genome
CC assembly. The entries are merged in miRBase 21.
//
AC MI0009695
ID dya-mir-316-2
FW MI0009652
CC Two mir-316 sequences map to a single locus in the caf1 genome
CC assembly. The entries are merged in miRBase 21.
//
AC MI0009686
ID dya-mir-9a-2
FW MI0009642
CC Two mir-9a sequences map to a single locus in the caf1 genome
CC assembly. The entries are merged in miRBase 21.
//
AC MI0008449
ID ptr-mir-1244-10
FW MI0008447
CC 11 previously annotated mir-1244 sequence map to only 9 loci in
CC the PanTro2.1.4 genome assembly. The entries are rationalised in
CC miRBase 21.
//
AC MI0008450
ID ptr-mir-1244-11
FW MI0008444
CC 11 previously annotated mir-1244 sequence map to only 9 loci in
CC the PanTro2.1.4 genome assembly. The entries are rationalised in
CC miRBase 21.
//
AC MI0008501
ID ptr-mir-1297-2
FW MI0008500
CC Two previously annotated mir-1297 sequences map to only one
CC locus in the PanTro2.1.4 genome assembly. The entries are merged
CC in miRBase 21.
//
AC MI0008532
ID ptr-mir-1324-2
FW MI0008531
CC Two previously annotated mir-1324 sequences map to only one
CC locus in the PanTro2.1.4 genome assembly. The entries are merged
CC in miRBase 21.
//
AC MI0008542
ID ptr-mir-141-2
FW MI0008541
CC Two previously annotated mir-141 sequences map to only one locus
CC in the PanTro2.1.4 genome assembly. The entries are merged in
CC miRBase 21.
//
AC MI0008758
ID ptr-mir-548i-6
FW MI0008757
CC Two previously annotated mir-548i sequences map to only one
CC locus in the PanTro2.1.4 genome assembly. The entries are merged
CC in miRBase 21.
//
AC MI0011794
ID dsi-mir-987-2
FW MI0011735
CC Two annotated mir-987 sequences map to a single locus in the
CC CAF1 genome assembly. The entries are merged in miRBase 21.
//
AC MI0007973
ID vvi-MIR828b
FW MI0007973
CC Rock (Trends Plant Sci. 2013 18:601-610) suggests that the
CC non-coding RNA Vvi-TAS4c has been mis-annotated as MIR828b. The
CC MIR828b locus is therefore removed from miRBase 21.
//
AC MI0015997
ID hsa-mir-3607
FW MI0015997
CC The mir-3607 locus overlaps with an annotated snoRNA, SNORD138
CC (PMID:24174566). On inspection, the pattern of conservation of
CC the locus in vertebrates suggests the snoRNA annotation is more
CC likely. The pattern of deep sequencing reads mapping to the
CC locus in human is also not supportive of the microRNA
CC annotation.
//
AC MI0022368
ID gga-mir-3607
FW MI0022368
CC The mir-3607 locus overlaps with an annotated snoRNA, SNORD138
CC (PMID:24174566). On inspection, the pattern of conservation of
CC the locus in vertebrates suggests the snoRNA annotation is more
CC likely. The pattern of deep sequencing reads mapping to the
CC locus in human is also not supportive of the microRNA
CC annotation.
//
AC MI0019581
ID dre-mir-132-3
FW MI0001991
CC The sequences previously named mir-132-2 and mir-132-3 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0019582
ID dre-mir-137-3
FW MI0002001
CC The sequences previously named mir-137-2 and mir-137-3 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0002008
ID dre-mir-143-2
FW MI0002007
CC The sequences previously named mir-143-1 and mir-143-2 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0019583
ID dre-mir-187-2
FW MI0001370
CC The sequences previously named mir-187-1 and mir-187-2 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0019591
ID dre-mir-23a-4
FW MI0001915
CC The sequences previously named mir-23a-2 and mir-23a-4 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0019592
ID dre-mir-24-5
FW MI0001919
CC The sequences previously named mir-24-2 and mir-24-5 map to the
CC same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0019589
ID dre-mir-27c-2
FW MI0001930
CC The sequences previously named mir-27c-1 and mir-27c-2 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0019590
ID dre-mir-725-2
FW MI0004769
CC The sequences previously named mir-725-1 and mir-725-2 map to
CC the same locus in the GRCz10 genome assembly. The entries are
CC therefore merged.
//
AC MI0016709
ID csi-MIR399e
FW MI0016713
CC Sequences previously named MIR399e and MIR399c map to the same
CC locus in the Csi_valencia_1.0 genome assembly. The entries are
CC merged.
//
AC MI0013316
ID csi-MIR166b
FW MI0013316
CC The sequences previously named csi-MIR166b and csi-MIR166d do not
CC map to MIR166 hairpin-like sequences in the Csi_valencia_1.0
CC genome assembly. The entries are deleted.
//
AC MI0016695
ID csi-MIR166d
FW MI0016695
CC The sequences previously named csi-MIR166b and csi-MIR166d do not
CC map to MIR166 hairpin-like sequences in the Csi_valencia_1.0
CC genome assembly. The entries are deleted.
//
AC MI0016720
ID csi-MIR477c
FW MI0016718
CC Sequences previously named MIR477a and MIR477c map to the same
CC locus in the Csi_valencia_1.0 genome assembly. The entries are
CC merged.
//
AC MI0016721
ID csi-MIR479
FW MI0016698
CC Sequences previously named MIR171b and MIR479c map to the same
CC locus in the Csi_valencia_1.0 genome assembly. The entries are
CC merged.
//
AC MI0016700
ID csi-MIR172b
FW MI0013302
CC Sequences previously named MIR172a and MIR172b map to the same
CC locus in the Csi_valencia_1.0 genome assembly. The entries are
CC merged.
//
AC MI0006409
ID hsa-mir-1273a
FW MI0006409
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0008474
ID ptr-mir-1273
FW MI0008474
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0014254
ID hsa-mir-1273d
FW MI0014254
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0015230
ID ppy-mir-1273a
FW MI0015230
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0016059
ID hsa-mir-1273e
FW MI0016059
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0018002
ID hsa-mir-1273f
FW MI0018002
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0018003
ID hsa-mir-1273g
FW MI0018003
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0020837
ID ggo-mir-1273c
FW MI0020837
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0020933
ID ppy-mir-1273e
FW MI0020933
CC Many of the miRNA loci annotated as mir-1273 family members have
CC patterns of mapped reads from RNAseq experiments that are not
CC consistent with the gene being processed as a miRNA. The reads
CC may be derived from SRP RNA, or derived Alu repeats.
CC hsa-mir-1273a,b,d,e,f,g are removed the database.
//
AC MI0016088
ID hsa-mir-3687-1
FW MI0016088
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-3687 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0031515
ID hsa-mir-3687-2
FW MI0031515
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-3687 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0016805
ID hsa-mir-4459
FW MI0016805
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-4459 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0016807
ID hsa-mir-4461
FW MI0016807
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-4461 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0016755
ID hsa-mir-4419a
FW MI0016755
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-4419 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0016861
ID hsa-mir-4419b
FW MI0016861
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-4419 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0020364
ID hsa-mir-6087
FW MI0020364
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-6087 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0022558
ID hsa-mir-6723
FW MI0022558
CC The pattern of reads from RNAseq experiments does not support
CC the annotation of mir-6723 as a miRNA. The sequence is removed
CC from the database in release 22.
//
AC MI0016053
ID hsa-mir-3653
FW MI0016053
CC The pattern of reads from RNAseq experiments, and the base
CC paired secondary structure of the putative pre-miRNA, do not
CC support the annotation of mir-3653 as a miRNA. The sequence is
CC removed from the database in release 22.
//
AC MI0016899
ID hsa-mir-4532
FW MI0016899
CC Reads that map to the annotated mir-4532 locus (many with one
CC mismatch) map exactly to annotated 28S rRNA sequences. The miRNA
CC annotation is therefore likely to be false, and the miRNA is
CC therefore removed from the database.
//
AC MI0017439
ID hsa-mir-4792
FW MI0017439
CC Reads that map to the annotated mir-4792 locus (many with one
CC mismatch) map exactly to annotated 28S rRNA sequences. The miRNA
CC annotation is therefore likely to be false, and the miRNA is
CC therefore removed from the database.
//
AC MI0016753
ID hsa-mir-4417
FW MI0016753
CC The pattern of reads that map to the annotated mir-4414 locus is
CC not consistent with processing as a miRNA. Additionally, the
CC reads may derive from annotated 28S rRNA sequences. The miRNA
CC annotation is therefore likely to be false, and the miRNA is
CC therefore removed from the database.
//
AC MI0016056
ID hsa-mir-3656
FW MI0016056
CC The pattern of reads that map to the annotated mir-3656 locus is
CC not consistent with processing as a miRNA. Additionally, the
CC reads may derive from annotated 28S rRNA sequences. The miRNA
CC annotation is therefore likely to be false, and the miRNA is
CC therefore removed from the database.
//
AC MI0009954
ID mmu-mir-1957a
FW MI0009954
CC The sequences annotated as mir-1957 family members are likely
CC fragments of tRNA sequences. Furthermore, the patterns of reads
CC mapping to these loci from deep sequencing experiments do not
CC support their annotation as miRNAs.
//
AC MI0021929
ID mmu-mir-1957b
FW MI0021929
CC The sequences annotated as mir-1957 family members are likely
CC fragments of tRNA sequences. Furthermore, the patterns of reads
CC mapping to these loci from deep sequencing experiments do not
CC support their annotation as miRNAs.
//
AC MI0023646
ID mml-mir-133d
FW MI0002533
CC mir-133a and mir-133d map to the same genomic locus in the
CC Mmul_8.0.1 genome assembly, so the entries are merged.
//
AC MI0020902
ID mml-mir-217b
FW MI0007674
CC mir-217a and mir-217b map to the same genomic locus in the
CC Mmul_8.0.1 genome assembly, so the entries are merged.
//
AC MI0007754
ID mml-mir-453
FW MI0023688
CC mir-323b and mir-453 map to the same genomic locus in the
CC Mmul_8.0.1 genome assembly, so the entries are merged.
//
AC MI0018199
ID mml-mir-371-2
FW MI0007715
CC mir-371-1 and mir-371-2 map to the same genomic locus in the
CC Mmul_8.0.1 genome assembly, so the entries are merged.
//
AC MI0024975
ID hsa-mir-7641-1
FW MI0024975
CC The sequences annotated as miR-7641 appear to be fragments of 5S
CC rRNA, so are removed from the database.
//
AC MI0024976
ID hsa-mir-7641-2
FW MI0024976
CC The sequences annotated as miR-7641 appear to be fragments of 5S
CC rRNA, so are removed from the database.
//
AC MI0025423
ID hhi-mir-7641
FW MI0025423
CC The sequences annotated as miR-7641 appear to be fragments of 5S
CC rRNA, so are removed from the database.
//
AC MI0018001
ID hsa-mir-5095
FW MI0018001
CC The mature miR-5095 sequence maps thousands of times to the
CC human genome, and is likely therefore not a bona fide miRNA.
//
AC MI0003572
ID hsa-mir-566
FW MI0003572
CC The sequence annotated as miR-566 maps many times to the human
CC genome, and the pattern of reads from deep sequencing datasets
CC does not support the miRNA annotation. The sequence is therefore
CC removed from the database.
//
AC MI0008781
ID ptr-mir-566
FW MI0008781
CC The sequence annotated as miR-566 maps many times to primate
CC genomes, and the pattern of reads from deep sequencing datasets
CC in human does not support the miRNA annotation. The sequence is
CC therefore removed from the database.
//
AC MI0015057
ID ppy-mir-566
FW MI0015057
CC The sequence annotated as miR-566 maps many times to primate
CC genomes, and the pattern of reads from deep sequencing datasets
CC in human does not support the miRNA annotation. The sequence is
CC therefore removed from the database.
//
AC MI0006388
ID hsa-mir-1254-1
FW MI0006388
CC The sequence annotated as miR-1254 maps many times to primate
CC genomes, and the pattern of reads from deep sequencing datasets
CC in human does not support the miRNA annotation. The sequence is
CC therefore removed from the database.
//
AC MI0008459
ID ptr-mir-1254
FW MI0008459
CC The sequence annotated as miR-1254 maps many times to primate
CC genomes, and the pattern of reads from deep sequencing datasets
CC in human does not support the miRNA annotation. The sequence is
CC therefore removed from the database.
//
AC MI0015212
ID ppy-mir-1254
FW MI0015212
CC The sequence annotated as miR-1254 maps many times to primate
CC genomes, and the pattern of reads from deep sequencing datasets
CC in human does not support the miRNA annotation. The sequence is
CC therefore removed from the database.
//
AC MI0016747
ID hsa-mir-1254-2
FW MI0016747
CC The sequence annotated as miR-1254 maps many times to primate
CC genomes, and the pattern of reads from deep sequencing datasets
CC in human does not support the miRNA annotation. The sequence is
CC therefore removed from the database.
//
AC MI0002721
ID ppy-mir-101-3
FW MI0014811
CC The 3 annotated mir-101 sequences map to just 2 loci in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0015257
ID ppy-mir-1302-2
FW MI0015256
CC The 5 annotated mir-1302 sequences map to just 4 loci in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014859
ID ppy-mir-199a-2
FW MI0002832
CC The 2 annotated mir-199a sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0015239
ID ppy-mir-1283b
FW MI0015007
CC mir-1283b and mir-518a-2 map to the same locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014974
ID ppy-mir-501
FW MI0014975
CC mir-501 and mir-502 map to the same locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014983
ID ppy-mir-509-2
FW MI0014982
CC The 3 annotated mir-509 sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014984
ID ppy-mir-509-3
FW MI0014982
CC The 3 annotated mir-509 sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014987
ID ppy-mir-511-2
FW MI0014986
CC The 2 annotated mir-511 sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014993
ID ppy-mir-513c
FW MI0014990
CC mir-513c and mir-513a-1 map to the same locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014995
ID ppy-mir-514-2
FW MI0014994
CC The 3 annotated mir-514 sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0014996
ID ppy-mir-514-3
FW MI0014994
CC The 3 annotated mir-514 sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0015000
ID ppy-mir-516a-2
FW MI0014999
CC The 3 annotated mir-516a sequences map to just 2 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0015008
ID ppy-mir-518b
FW MI0015013
CC Some annotated mir-518/519/526 family sequences collapse to the
CC same loci in the P_pygmaeus_2.0.2 genome assembly. The entries
CC are rationalised and merged.
//
AC MI0015007
ID ppy-mir-518a-2
FW MI0015006
CC Some annotated mir-518/519/526 family sequences collapse to the
CC same loci in the P_pygmaeus_2.0.2 genome assembly. The entries
CC are rationalised and merged.
//
AC MI0015139
ID ppy-mir-675b
FW MI0015138
CC The 2 annotated mir-675 sequences map to just 1 locus in the
CC P_pygmaeus_2.0.2 genome assembly. The entries are rationalised
CC and merged.
//
AC MI0015004
ID ppy-mir-517b
FW MI0015003
CC Some annotated mir-517 family sequences collapse to the same
CC loci in the P_pygmaeus_2.0.2 genome assembly. The entries are
CC rationalised and merged.
//
AC MI0015005
ID ppy-mir-517c
FW MI0015003
CC Some annotated mir-517 family sequences collapse to the same
CC loci in the P_pygmaeus_2.0.2 genome assembly. The entries are
CC rationalised and merged.
//
AC MI0015015
ID ppy-mir-519b
FW MI0015013
CC Some annotated mir-518/519/526 family sequences collapse to the
CC same loci in the P_pygmaeus_2.0.2 genome assembly. The entries
CC are rationalised and merged.
//
AC MI0015016
ID ppy-mir-519c
FW MI0015013
CC Some annotated mir-518/519/526 family sequences collapse to the
CC same loci in the P_pygmaeus_2.0.2 genome assembly. The entries
CC are rationalised and merged.
//
AC MI0015010
ID ppy-mir-518d
FW MI0015009
CC Some annotated mir-518/519/526 family sequences collapse to the
CC same loci in the P_pygmaeus_2.0.2 genome assembly. The entries
CC are rationalised and merged.
//
AC MI0015033
ID ppy-mir-526a-1
FW MI0015011
CC Some annotated mir-518/519/526 family sequences collapse to the
CC same loci in the P_pygmaeus_2.0.2 genome assembly. The entries
CC are rationalised and merged.
//
AC MI0028420
ID efu-mir-9189e
FW MI0028420
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028568
ID efu-mir-9189d
FW MI0028568
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028569
ID efu-mir-9189g
FW MI0028569
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028570
ID efu-mir-9189c
FW MI0028570
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028571
ID efu-mir-9189f
FW MI0028571
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028572
ID efu-mir-9189a
FW MI0028572
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028573
ID efu-mir-9189b
FW MI0028573
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0028574
ID efu-mir-9189h
FW MI0028574
CC The sequences annotated mir-9189 map thousands of times to the
CC bat genome, and are identified as a family of SINE repeats in
CC PUBMED:18068947.
//
AC MI0022064
ID hbr-MIR159b
FW MI0022053
CC MIR159a and MIR159b map to the same locus in the Hevbra1.0
CC genome assembly. The entries are therefore merged.
//
AC MI0029284
ID dvi-mir-9541
FW MI0030968
CC Two duplicate entries are merged in miRBase 22.
//
AC MI0018004
ID hsa-mir-5096
FW MI0018004
CC The pattern of smRNAseq reads mapping to the mir-5096 locus is
CC not consistent with miRNA processing. The sequence is also
CC similar to that of several coiled coil protein-coding genes.
CC mir-5096 is therefore removed from miRBase 22.
//