Accession
MI0000130
Description
Drosophila melanogaster
dme-mir-10 precursor miRNA
Gene family
MIPF0000033;
mir-10
Literature search
19 open access papers mention dme-mir-10
(178 sentences)
(178 sentences)
Sequence
759116
reads,
6448
reads per million, 49 experiments
ccacgucuACCCUGUAGAUCCGAAUUUGUUuuauacuagcuuuaaggaCAAAUUCGGUUCUAGAGAGGUUUgugugg
(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))
(((((...(((((.((((.(((((((((((((............))))))))))))).)))).)).)))...)))))
Structure
ucu - G U auacu
ccacg ACC CU UAGA CCGAAUUUGUUuu a
||||| ||| || |||| |||||||||||||
ggugu UGG GA AUCU GGCUUAAACagga g
gUU A G U auuuc
Annotation confidence
High
Do you think this miRNA is real?
Comments
The first cloning experiments identified the mature miR-10 from the 5' arm of the D. melanogaster precursor [1,3]. High-throughput sequencing later showed that the sequence from the 3' arm dominates [4-5].
Genome context
chr3R: 6809506-6809582 [-]
Database links
Mature dme-miR-10-5p
| Accession | MIMAT0000115 |
| Description | Drosophila melanogaster dme-miR-10-5p mature miRNA |
| Sequence | 9 - ACCCUGUAGAUCCGAAUUUGUU - 30 |
| Evidence |
experimental
cloned [1,3], Northern [1-3], 454 [4-5], Illumina [5] |
| Database links |
|
Mature dme-miR-10-3p
| Accession | MIMAT0012531 |
| Description | Drosophila melanogaster dme-miR-10-3p mature miRNA |
| Sequence | 49 - CAAAUUCGGUUCUAGAGAGGUUU - 71 |
| Evidence |
experimental
cloned [1,3], Northern [1-3], 454 [4-5], Illumina [5] |
| Database links |
|
References
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