Stem-loop mmu-mir-130b

Accession

MI0000408

Symbol

MGI: Mir130b

Description

Mus musculus mmu-mir-130b precursor miRNA

Literature search

82 open access papers mention mmu-mir-130b
(323 sentences)

Sequence

83070 reads, 321 reads per million, 106 experiments

ggcuuguuggacACUCUUUCCCUGUUGCACUACUgugggccucugggaagCAGUGCAAUGAUGAAAGGGCAUcugucgggcc
((((((..(((..(((((((..(((((((((.((.....((...))..)).)))))))))..)))))))..)))..))))))

Structure

      uu   cA       CC         A  guggg  u 
ggcuug  gga  CUCUUUC  UGUUGCACU CU     cc  
||||||  |||  |||||||  ||||||||| ||     || c
ccgggc  ucU  GGGAAAG  GUAACGUGA ga     gg  
      ug   AC       UA         C  ---ag  u 

Annotation confidence Medium

Genome context

chr16: 17124061-17124142 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mmu-mir-130b

Mature mmu-miR-130b-5p

• Accession: MIMAT0004583
• Description: Mus musculus mmu-miR-130b-5p mature miRNA
• Sequence: 13 - ACUCUUUCCCUGUUGCACUACU - 34
• Evidence: experimental ; cloned [3], Illumina [4-5]

Mature mmu-miR-130b-3p

• Accession: MIMAT0000387
• Description: Mus musculus mmu-miR-130b-3p mature miRNA
• Sequence: 51 - CAGUGCAAUGAUGAAAGGGCAU - 72
• Evidence: experimental ; cloned [1-3], Northern [1], Illumina [4-5]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 12919684
   Embryonic stem cell-specific MicroRNAs
   "Houbaviy HB, Murray MF, Sharp PA"
   "Dev Cell (2003) 5:351-358


3. PubMed ID: 15538371
   A pancreatic islet-specific microRNA regulates insulin secretion
   "Poy MN, Eliasson L, Krutzfeldt J, Kuwajima S, Ma X, Macdonald PE, Pfeffer S, Tuschl T, Rajewsky N, Rorsman P, Stoffel M"
   "Nature (2004) 432:226-230


4. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


5. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009