Accession
MI0000505
Description
Caenorhabditis briggsae
cbr-mir-52 precursor miRNA
Gene family
MIPF0000160;
mir-52
Sequence
uuucccgcucugacagucCACCCGUACAUAUGUUUCCGUGCUugacauagagcucaaucacgauacaaugagcggguagccggucaucgagucggaac
.((((.((((((((.(.(.((((((.(((.(((.((.(((.((((........)))).))))).)))))).)))))).).).))))..)))).)))).
.((((.((((((((.(.(.((((((.(((.(((.((.(((.((((........)))).))))).)))))).)))))).).).))))..)))).)))).
Structure
u c -- a u C A A U C C cau uucc gcuc ugac g c ACCCGU CAU UGU UC GUG Uuga a |||| |||| |||| | | |||||| ||| ||| || ||| |||| aagg ugag acug c g ugggcg gua aca ag cac aacu g c c cu g c a a - u - u cga
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1,2]. The expression of this miRNA has not been verified in C. briggsae.
Genome context
chrIV: 7363013-7363110 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-52
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-52
| Accession | MIMAT0000476 |
| Description | Caenorhabditis briggsae cbr-miR-52 mature miRNA |
| Sequence | 19 - CACCCGUACAUAUGUUUCCGUGCU - 42 |
| Evidence | not_experimental |
References
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