Accession
MI0000753
Description
Caenorhabditis elegans
cel-mir-354 precursor miRNA mir-354
Gene
family?
family?
RF00799;
mir-354
Literature search
2 open access papers mention cel-mir-354
(2 sentences)
(2 sentences)
Sequence
277
reads,
5
reads per million, 11 experiments
cagagccgacuaagcaccuuGGUGCGGCUGCAGACGGGUAUccggcucgacguucauacaucacgacuucuuuccuuuuACCUUGUUUGUUGCUGCUCCUauugguuuug
(((((((((...........((.(((((.(((((((((((...((...((.(((..........))).))...))...)))).))))))).))))).))..)))))))))
(((((((((...........((.(((((.(((((((((((...((...((.(((..........))).))...))...)))).))))))).))))).))..)))))))))
Structure
cuaagcaccuu U U - Ucc cuc c caua
cagagccga GG GCGGC GCAGACG GGUA gg ga guu c
||||||||| || ||||| ||||||| |||| || || |||
guuuugguu CC CGUCG UGUUUGU CCAu cc cu cag a
---------aU U U U uuu uuu u cacu
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing. The 5' end of the mature sequence ws mapped by PCR, but the 3' ends have not been experimentally determined.
Genome context
chrI: 14468382-14468491 [-]
Database links
Mature cel-miR-354-3p
| Accession | MIMAT0000696 |
| Description | Caenorhabditis elegans cel-miR-354-3p mature miRNA |
| Sequence | 80 - ACCUUGUUUGUUGCUGCUCCU - 100 |
| Evidence |
experimental
cloned [1], PCR [1] |
Mature cel-miR-354-5p
| Accession | MIMAT0031894 |
| Description | Caenorhabditis elegans cel-miR-354-5p mature miRNA |
| Sequence | 21 - GGUGCGGCUGCAGACGGGUAU - 41 |
| Evidence | not_experimental |
| Database links |
|
References
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