miRBase entry: hsa-mir-302d

Stem-loop hsa-mir-302d


Accession
MI0000774
Symbol
HGNC: MIR302D
Description
Homo sapiens hsa-mir-302d precursor miRNA mir-302
Gene
family?
RF00668; mir-302

Summary
Caution, this is an AI generated summary based on literature. This may have errors. ?

MIR302D is a gene encoding the miR-302d-3p microRNA, a member of the highly conserved miR-302 family, which is known to play a role in the self-renewal of human embryonic stem cells and is involved in the regulation of the cell cycle [PMC5906557][PMC4218680'>PMC5906557][PMC4218680[PMC4218680]. This microRNA family, including MIR302D, is predominantly expressed in pluripotent stem cells and multipotent progenitor cells [PMC5966391]. In a study focusing on extracellular vesicles from morphine-treated organoids, MIR302D levels were found to be increased [PMC8225561]. The study also identified c-Jun as an upstream transcription factor potentially regulating MIR302D expression and implicated this regulation as an alternative explanation for JNK pathway involvement in AMD pathogenesis [PMC5906557]. The regulatory role of c-Jun on MIR302D expression was further illustrated using pharmacological modulators of the JNK pathway [PMC5906557]. Additionally, MIR302D was shown to potentially regulate IL-25 expression and was involved in inhibiting CCL5 expression under hypoxic conditions, which suggests its role in inflammatory responses [PMC8225561][PMC4454318[PMC4454318]. However, the statement regarding MIR302D's association with inhibition of endothelial cell migration and proliferation in human induced pluripotent stem cell-derived endothelial cells from end-stage renal disease patients is not supported by the provided reference [PMC8685359], and therefore, this part of the summary should be disregarded.

Literature search
182 open access papers mention hsa-mir-302d
(929 sentences)

Sequence

33 reads, 4 reads per million, 9 experiments
ccucuACUUUAACAUGGAGGCACUUGCugugacaugacaaaaaUAAGUGCUUCCAUGUUUGAGUGUgg
((..(((((.((((((((((((((((.(((......)))....)))))))))))))))).))))).))

Structure
  uc     U                ---C   ga 
cc  uACUU AACAUGGAGGCACUUG    ugu  c
||  ||||| ||||||||||||||||    |||   
gg  GUGAG UUGUACCUUCGUGAAU    aca  a
  -U     U                aaaa   gu 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Human miR-302a (MIR:MI0000738), miR-302b (MIR:MI0000772), miR-302c (MIR:MI0000773), miR-302d (MIR:MI0000774) and miR-367 (MIR:MI0000775) are clustered on chromosome 4.

Genome context
chr4: 112648004-112648071 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from hsa-mir-302d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-302d-5p

Accession MIMAT0004685
Description Homo sapiens hsa-miR-302d-5p mature miRNA
Sequence 6 - ACUUUAACAUGGAGGCACUUGC - 27
Evidence experimental
cloned [2]

Mature hsa-miR-302d-3p

Accession MIMAT0000718
Description Homo sapiens hsa-miR-302d-3p mature miRNA
Sequence 44 - UAAGUGCUUCCAUGUUUGAGUGU - 66
Evidence experimental
cloned [1-2], Northern [1]
Database links
Predicted targets

References

  1. PubMed ID: 15183728
    Human embryonic stem cells express a unique set of microRNAs
    "Suh MR, Lee Y, Kim JY, Kim SK, Moon SH, Lee JY, Cha KY, Chung HM, Yoon HS, Moon SY, Kim VN, Kim KS"
    "Dev Biol (2004) 270:488-498

  2. PubMed ID: 17604727
    A mammalian microRNA expression atlas based on small RNA library sequencing
    "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
    "Cell (2007) 129:1401-1414