Accession
MI0000788
Symbol
HGNC:
MIR380
Description
Homo sapiens
hsa-mir-380 precursor miRNA mir-379
Gene
family?
family?
RF04292;
mir-379
Literature search
13 open access papers mention hsa-mir-380
(18 sentences)
(18 sentences)
Sequence
1033
reads,
6
reads per million, 53 experiments
aagaUGGUUGACCAUAGAACAUGCGCuaucucugugucgUAUGUAAUAUGGUCCACAUCUU
((((((...(((((((..(((((((.(((....))).)))))))..)))))))..))))))
((((((...(((((((..(((((((.(((....))).)))))))..)))))))..))))))
Structure
GUU GA C c
aagaUG GACCAUA ACAUGCG uau u
|||||| ||||||| ||||||| |||
UUCUAC CUGGUAU UGUAUgc gug c
-AC AA u u
Annotation confidence
High
Do you think this miRNA is real?
Comments
Landgraf et al. confirm that the 3' product is the predominant one [3].
Genome context
chr14: 101025017-101025077 [+]
Clustered miRNAs
12 other miRNAs are < 10 kb from hsa-mir-380
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Disease association
hsa-mir-380 is associated with one or more human diseases in the Human microRNA Disease Database
| Disease | Description | Category | PubMed ID |
|---|
Database links
Mature hsa-miR-380-5p
| Accession | MIMAT0000734 |
| Description | Homo sapiens hsa-miR-380-5p mature miRNA |
| Sequence | 5 - UGGUUGACCAUAGAACAUGCGC - 26 |
| Evidence | not_experimental |
Mature hsa-miR-380-3p
| Accession | MIMAT0000735 |
| Description | Homo sapiens hsa-miR-380-3p mature miRNA |
| Sequence | 40 - UAUGUAAUAUGGUCCACAUCUU - 61 |
| Evidence |
experimental
cloned [3] |
| Database links |
|
| Predicted targets |
|
References
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