Accession
MI0001029
Description
Oryza sativa
osa-MIR395d precursor miRNA
Gene family
MIPF0000016;
MIR395
Literature search
40 open access papers mention osa-MIR395d
(174 sentences)
(174 sentences)
Sequence
33
reads,
22
reads per million, 2 experiments
guauugucgugaguucccuucaagcacuucacguggcacuaucucaaugccuacuauGUGAAGUGUUUGGGGGAACUCucgauaucac
((..(((((.(((((((((.((((((((((((((((((.........))))....))))))))))))))))))))))).)))))..))
((..(((((.(((((((((.((((((((((((((((((.........))))....))))))))))))))))))))))).)))))..))
Structure
au u u ---- cua gu ugucg gaguucccu caagcacuucacgu ggca u || ||||| ||||||||| |||||||||||||| |||| c ca auagc CUCAAGGGG GUUUGUGAAGUGua ccgu u cu u - ucau aac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1]. Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the genes have been renamed to reflect this arrangement [2].
Genome context
Chr4: 31805055-31805142 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from osa-MIR395d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR395d
| Accession | MIMAT0000960 |
| Description | Oryza sativa osa-miR395d mature miRNA |
| Sequence | 58 - GUGAAGUGUUUGGGGGAACUC - 78 |
| Evidence | not_experimental |
| Database links |
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References
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