miRBase entry: osa-MIR395a

Stem-loop osa-MIR395a

Oryza sativa osa-MIR395a precursor miRNA
Gene family
MIPF0000016; MIR395

Literature search
40 open access papers mention osa-MIR395a
(186 sentences)


1 reads, 0 reads per million, 1 experiments

u    c             u   uc       --   g      au    --a        u c      cu   a 
 uguc acuggaguucucc caa  cacuuca  gua auagcu  ggcu   ggccucau g auugca  guu c
 |||| ||||||||||||| |||  |||||||  ||| ||||||  ||||   |||||||| | ||||||  |||  
 acag ugacCUCAAGGGG GUU  GUGAAGU  uau uaucga  ucga   ccggggua c uagugu  caa a
c    u             -   -C       Ga   g      --    aaa        - -      --   u 

Annotation confidence Not enough data
Do you think this miRNA is real?
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1]. Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the genes have been renamed to reflect this arrangement [2].

Genome context
Chr4: 31805494-31805635 [-]
Clustered miRNAs
6 other miRNAs are < 10 kb from osa-MIR395a
Name Accession Chromosome Start End Strand Confidence

Database links

Mature osa-miR395a

Accession MIMAT0000973
Description Oryza sativa osa-miR395a mature miRNA
Evidence experimental
Illumina [3]


  1. PubMed ID: 15200956
    Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
    "Jones-Rhoades MW, Bartel DP"
    "Mol Cell (2004) 14:787-799

  2. PubMed ID: 16117853
    Molecular evolution of the rice miR395 gene family
    "Guddeti S, Zhang DC, Li AL, Leseberg CH, Kang H, Li XG, Zhai WX, Johns MA, Mao L"
    "Cell Res (2005) 15:631-638

  3. PubMed ID: 19903869
    Rice MicroRNA effector complexes and targets
    "Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y"
    "Plant Cell (2009) 21:3421-3435