Accession
MI0001082
Description
Arabidopsis thaliana
ath-MIR156g precursor miRNA
Literature search
81 open access papers mention ath-MIR156g
(770 sentences)
(770 sentences)
Sequence
55579
reads,
264.0
reads per million, 182 experiments
auaacgaaggCGACAGAAGAGAGUGAGCACAcauggcucuuuuucuagcaugcucaugcucgaaagcucugcguGCUUACUCUCUUCUUGUCUCCugcucucu
.......(((.(((((((((((((((((((.((.((((....(((.(((((....))))).))))))).)).))))))))))))))).)))).))).......
.......(((.(((((((((((((((((((.((.((((....(((.(((((....))))).))))))).)).))))))))))))))).)))).))).......
Structure
auaacga C - A u cuuu u g
agg GACA GAAGAGAGUGAGCAC ca ggcu uuc agcau c
||| |||| ||||||||||||||| || |||| ||| |||||
uCC CUGU CUUCUCUCAUUCGug gu ucga aag ucgua u
ucucucg U U c c ---- c c
Annotation confidence
High
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR156 family [1], subsequently verified in [2]. It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors.
Genome context
chr2: 8412516-8412618 [-]
Database links
Mature ath-miR156g-5p
| Accession | MIMAT0001012 |
| Description | Arabidopsis thaliana ath-miR156g-5p mature miRNA |
| Sequence | 11 - CGACAGAAGAGAGUGAGCACA - 31 |
| Evidence |
experimental
454 [2], Illumina [3] |
Mature ath-miR156g-3p
| Accession | MIMAT0053842 |
| Description | Arabidopsis thaliana ath-miR156g-3p mature miRNA |
| Sequence | 75 - GCUUACUCUCUUCUUGUCUCC - 95 |
| Evidence |
experimental
unknown |
References
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