Accession
MI0001083
Description
Arabidopsis thaliana
ath-MIR156h precursor miRNA
Literature search
81 open access papers mention ath-MIR156h
(796 sentences)
(796 sentences)
Sequence
148129
reads,
677.0
reads per million, 177 experiments
augaaaaaugUUGACAGAAGAAAGAGAGCACAACcugggauuagcaaaaagauaguuuugcccuugucgggaguguGCUCUCUUUCCUUCUGCCACCAucauugcg
.......(((.((.((((((((((((((((((.(((((.(...((((((......))))))...).)))))..)))))))))))).)))))).)).))).......
.......(((.((.((((((((((((((((((.(((((.(...((((((......))))))...).)))))..)))))))))))).)))))).)).))).......
Structure
augaaaa U A - -A g uua ag
aug UG CAGAAG AAAGAGAGCACA Ccugg a gcaaaa a
||| || |||||| |||||||||||| ||||| | ||||||
uAC AC GUCUUC UUUCUCUCGugu gggcu u cguuuu u
gcguuac C C C ga g ucc ga
Annotation confidence
High
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR156 family [1], subsequently verified in [2]. It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors.
Genome context
chr5: 22597012-22597117 [-]
Database links
Mature ath-miR156h-5p
| Accession | MIMAT0001013 |
| Description | Arabidopsis thaliana ath-miR156h-5p mature miRNA |
| Sequence | 11 - UUGACAGAAGAAAGAGAGCACAAC - 34 |
| Evidence |
experimental
454 [2], Illumina [3] |
Mature ath-miR156h-3p
| Accession | MIMAT0053843 |
| Description | Arabidopsis thaliana ath-miR156h-3p mature miRNA |
| Sequence | 77 - GCUCUCUUUCCUUCUGCCACCA - 98 |
| Evidence |
experimental
unknown |
References
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