Accession
MI0001120
Description
Oryza sativa
osa-MIR169e precursor miRNA
Literature search
63 open access papers mention osa-MIR169e
(315 sentences)
(315 sentences)
Sequence
1148
reads,
804
reads per million, 2 experiments
gcugguugugUAGCCAAGGAUGACUUGCCGGccugguuuguguucaucagcaauccagcauaugcuguauugccgugugugaucgaucgaugcauggaccggcaaguuauuuucuuuggcuacauuacaacc
...((((((((((((((((((((((((((((((..(((((((.(((((((((((.((((....)))).)))))..)).)))).))..))).))..)).)))))))))))...)))))))))))...))))))
...((((((((((((((((((((((((((((((..(((((((.(((((((((((.((((....)))).)))))..)).)))).))..))).))..)).)))))))))))...)))))))))))...))))))
Structure
gcu --- --- - ug - -- u - -- c a gguugu gUAGCCAAGGA UGACUUGCCGG cc gu uug ug ucau ca gcaau cagc u |||||| ||||||||||| ||||||||||| || || ||| || |||| || ||||| |||| ccaaca caucgguuucu auugaacggcc gg cg agc gc agug gu cguua gucg a --- uua uuu a ua u ua u u gc u u
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence is a predicted paralogue of the previously identified miR169 family [1]. It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors.
Genome context
Chr2: 31205866-31205997 [-]
Database links
Mature osa-miR169e
| Accession | MIMAT0001050 |
| Description | Oryza sativa osa-miR169e mature miRNA |
| Sequence | 11 - UAGCCAAGGAUGACUUGCCGG - 31 |
| Evidence | not_experimental |
| Database links |
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References
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