Stem-loop gga-mir-124b

Accession

MI0001252

Description

Gallus gallus gga-mir-124b precursor miRNA

Gene family

MIPF0000021; mir-124

Literature search

13 open access papers mention gga-mir-124b
(39 sentences)

Sequence

417 reads, 7 reads per million, 3 experiments

agccccagcguuuuguguucacugcagaccuugauuuaaugucacacgaUUAAGGCACGCAGUGAAUGCCAaaguuuggggcagccugggcug
.(((((((..(((.(((((((((((...((((((((...........))))))))...))))))))))).)))..)))))))(((....))).

Structure

----------a       cg   u           aga        uaau 
           gccccag  uuu guguucacugc   ccuugauu    g
           |||||||  ||| |||||||||||   ||||||||    u
           cgggguu  aaA CGUAAGUGACG   GGAAUUag    c
gucggguccga       ug   C           CAC        caca 

Annotation confidence Not enough data

Comments

This sequence is a predicted homologue of a verified miRNA from human, mouse or rat. Its expression has not been validated in chicken.

Genome context

chr23: 2223486-2223578 [+]

Mature gga-miR-124b

• Accession: MIMAT0001174
• Description: Gallus gallus gga-miR-124b mature miRNA
• Sequence: 50 - UUAAGGCACGCAGUGAAUGCCA - 71
• Evidence: not_experimental

References

1. PubMed ID: 15592404
   Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
   "International Chicken Genome Sequencing Consortium"
   "Nature (2004) 432:695-716