Accession
MI0001369
Description
Danio rerio
dre-mir-183 precursor miRNA mir-183
Gene
family?
family?
RF00663;
mir-183
Literature search
13 open access papers mention dre-mir-183
(56 sentences)
(56 sentences)
Sequence
10121
reads,
683
reads per million, 11 experiments
gacuccuguucugugUAUGGCACUGGUAGAAUUCACUGugaaagcacacuaucagUGAAUUACCAAAGGGCCAUAAacagagcagagaaagaaccacg
...(((((((((((.((((((..(((((..((((((((..(........)..)))))))))))))....)))))).))))))))).))..........
...(((((((((((.((((((..(((((..((((((((..(........)..)))))))))))))....)))))).))))))))).))..........
Structure
-------gac - g --AC GA ug aag
uc cuguucugu UAUGGC UGGUA AUUCACUG a c
|| ||||||||| |||||| ||||| |||||||| |
ag gacgagaca AUACCG ACCAU UAAGUgac u a
gcaccaagaa a A GGAA -- ua cac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr4: 15074566-15074663 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-183
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dre-miR-183-5p
| Accession | MIMAT0001273 |
| Description | Danio rerio dre-miR-183-5p mature miRNA |
| Sequence | 16 - UAUGGCACUGGUAGAAUUCACUG - 38 |
| Evidence |
experimental
PCR [1], cloned [2] |
| Database links |
|
| Predicted targets |
|
Mature dre-miR-183-3p
| Accession | MIMAT0031921 |
| Description | Danio rerio dre-miR-183-3p mature miRNA |
| Sequence | 56 - UGAAUUACCAAAGGGCCAUAA - 76 |
| Evidence | not_experimental |
| Database links |
|
References
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