Accession
MI0001394
Description
Caenorhabditis briggsae
cbr-mir-231 precursor miRNA
Sequence
7204
reads,
640.0
reads per million, 3 experiments
cuagcaccucaauguuguuCUGUCUGUUUCCAUAGCUUAUAUuguaagguacuuaUAAGCUCGUGAACAACAGGCAGGAcaacuggaagugguguuuuuuuuca
..((((((.....(((((((((((((((..(((((((((((..(((...))).)))))))).)))...))))))))))))))).......))))))........
..((((((.....(((((((((((((((..(((((((((((..(((...))).)))))))).)))...))))))))))))))).......))))))........
Structure
------cu --ucaau -UC - Uu a
agcacc guuguuCUGUCUGUU CAU AGCUUAUA gua
|||||| ||||||||||||||| ||| |||||||| ||| g
uugugg caacAGGACGGACAA GUG UCGAAUau cau
acuuuuuu ugaaggu CAA C -u g
Annotation confidence
High
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 2 positions.
Genome context
chrIII: 11907626-11907729 [+]
Database links
Mature cbr-miR-231-5p
| Accession | MIMAT0053552 |
| Description | Caenorhabditis briggsae cbr-miR-231-5p mature miRNA |
| Sequence | 20 - CUGUCUGUUUCCAUAGCUUAUAU - 42 |
| Evidence | not_experimental |
Mature cbr-miR-231-3p
| Accession | MIMAT0001293 |
| Description | Caenorhabditis briggsae cbr-miR-231-3p mature miRNA |
| Sequence | 56 - UAAGCUCGUGAACAACAGGCAGGA - 79 |
| Evidence | not_experimental |
References
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