Accession
MI0001398
Description
Caenorhabditis briggsae
cbr-mir-51 precursor miRNA
Gene family
MIPF0000268;
mir-51
Sequence
cgucaucgaaucucaacgucaaacggauccgaagacguccaucUACCCGUAGCUCCUUGCCAUGUUacugguaaaagugaacauggaaguugguccggguacauggccaguaggaguuaugaagacguguugagguuucaagauu
.(((...(((((((((((((....((((........)))).......((((((((((.(((((((..((((...((.(.........).))...))))..)))))))....))))))))))..)))))..))))))))...))).
.(((...(((((((((((((....((((........)))).......((((((((((.(((((((..((((...((.(.........).))...))))..)))))))....))))))))))..)))))..))))))))...))).
Structure
c auc -- aaacggauccgaagacguccaucUACC ---U Ua uaa g gaa guc gaaucuca acguc CGUAGCUCCU GCCAUGU cugg aa u c ||| |||||||| ||||| |||||||||| ||||||| |||| || | a uag uuuggagu ugcag guauugagga cgguaca ggcc uu a u u aac ug -------------------------aa ugac ug ugg g agg
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. The mature sequence differs from the elegans sequence at 2 positions.
Genome context
chrIV: 7366589-7366733 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cbr-mir-51
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cbr-miR-51
| Accession | MIMAT0001297 |
| Description | Caenorhabditis briggsae cbr-miR-51 mature miRNA |
| Sequence | 44 - UACCCGUAGCUCCUUGCCAUGUU - 66 |
| Evidence | not_experimental |
References
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