Stem-loop dre-let-7d-2

Accession

MI0001870

Description

Danio rerio dre-let-7d-2 precursor miRNA

Literature search

42 open access papers mention dre-let-7d-2
(305 sentences)

Sequence

5588 reads, 485 reads per million, 11 experiments

cgcugcaggcUGAGGUAGUUGGUUGUAUGGUUuugcaucauaaucagccuggaguuaaCUGUACAACCUUCUAGCUUUCCcugcggug
(((((((((..(((.(((..((((((((((((..((.(((.........))).)).))))))))))))..))).)))..)))))))))

Structure

         cU   G   UU            uu  a   uaa 
cgcugcagg  GAG UAG  GGUUGUAUGGUU  gc uca   u
|||||||||  ||| |||  ||||||||||||  || |||   c
guggcgucC  UUC AUC  CCAACAUGUCaa  ug ggu   a
         CU   G   UU            -u  a   ccg 

Annotation confidence High

Genome context

chr19: 9429857-9429944 [+]

Mature dre-let-7d-5p

• Accession: MIMAT0001762
• Description: Danio rerio dre-let-7d-5p mature miRNA
• Sequence: 11 - UGAGGUAGUUGGUUGUAUGGUU - 32
• Evidence: experimental ; cloned [1]

Mature dre-let-7d-3p

• Accession: MIMAT0031931
• Description: Danio rerio dre-let-7d-3p mature miRNA
• Sequence: 59 - CUGUACAACCUUCUAGCUUUCC - 80
• Evidence: not_experimental

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293