miRBase entry: dre-let-7g-2

Stem-loop dre-let-7g-2

Accession

MI0001874

Description

Danio rerio dre-let-7g-2 precursor miRNA

Gene family

MIPF0000002; let-7

Literature search

39 open access papers mention dre-let-7g-2
(216 sentences)

Sequence

11780 reads, 725 reads per million, 11 experiments

guggacugugggaUGAGGUAGUAGUUUGUAUAGUUuuaggaucacaccagaucugggagauaacuauacagucuacugucuuucccacgguuaccgc
(((((((((((((.((((((((((.((((((((((...(((((......))))).......)))))))))).)))))))))))))))))))..))))

Structure

    --         U          U          ----uua     ac 
gugg  acuguggga GAGGUAGUAG UUGUAUAGUU       ggauc  a
||||  ||||||||| |||||||||| ||||||||||       |||||   
cgcc  uggcacccu uucugucauc gacauaucaa       ucuag  c
    au         -          u          uagaggg     ac

Annotation confidence Not enough data

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Genome context

chr23: 28536361-28536457 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dre-let-7g-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dre-let-7g

Accession	MIMAT0001765
Description	Danio rerio dre-let-7g mature miRNA
Sequence	14 - UGAGGUAGUAGUUUGUAUAGUU - 35
Evidence	experimental cloned [1]
Database links
Predicted targets

References

PubMed ID: 15937218
The developmental miRNA profiles of zebrafish as determined by small RNA cloning
"Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
"Genes Dev (2005) 19:1288-1293