Stem-loop dre-let-7i

Accession

MI0001876

Description

Danio rerio dre-let-7i precursor miRNA

Literature search

39 open access papers mention dre-let-7i
(214 sentences)

Sequence

2967 reads, 211 reads per million, 11 experiments

guguacuggcUGAGGUAGUAGUUUGUGCUGUUgguugggaugugacauugcccguuauggagaugacugcgcaagcuacucccuugccagugcug
..((((((((.((((.((((((((((((.((..(((....((((((.......))))))..))).)).)))))))))))).))))))))))))..

Structure

gu        U    U            U  Ug   ggga      au 
  guacuggc GAGG AGUAGUUUGUGC GU  guu    ugugac  u
  |||||||| |||| |||||||||||| ||  |||    ||||||  g
  cgugaccg uucc ucaucgaacgcg ca  uag    guauug  c
gu        -    c            u  -g   --ag      cc 

Annotation confidence Low

Genome context

chr25: 1629655-1629749 [-]

References

1. PubMed ID: 15937218
   The developmental miRNA profiles of zebrafish as determined by small RNA cloning
   "Chen PY, Manninga H, Slanchev K, Chien M, Russo JJ, Ju J, Sheridan R, John B, Marks DS, Gaidatzis D, Sander C, Zavolan M, Tuschl T"
   "Genes Dev (2005) 19:1288-1293